Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00305 ATGACGAAGGTCTCCCATAACTTCGATGATGCACTGGCGTGTGTTAACTCATATAATAGGAAAAAGTATGATGAGTTTTTAAACATCACAATTGATTTGAAATTTAAGAAGAATTTGTTTAAAGGGCATTCGGATTTAATTTTGGGATTCAACACCTTAACGCCAACGGAATGTCAAATCAAACTTCCTCATAATACCGCTTGTTGTGACTGCAATTTCATGCAATAG 228 0.3509 MTKVSHNFDDALACVNSYNRKKYDEFLNITIDLKFKKNLFKGHSDLILGFNTLTPTECQIKLPHNTACCDCNFMQ 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00305 75 SUPERFAMILY PAH2 domain 7 55 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00305 Trre-Chr3 2004952 2005363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00305 19 62 WRKY Transcription Factor Family AT4G12020 41.818 8.79e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00305 K11644 - tpra:123915142 70.8626