Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00289 ATGGAATCATCATCATCATCATGGTTCATAGCACTTATCTCTTTCTGCATCATCTTCTTCATCAGAGCCACCTTCTCTTACCTCACTACCACCACCAAAACCACCGTAACTCTCCCTCCCGGTCCACCTTACATACCAATCATCACAACCCTCTTATGGCTTCGAAAATCATTCTCTCAACTTGAACCTTTTCTCAAAAACCTCCACACCAAATACGGTCCAATCATCACTCTCAGAATCGGTTCTCGTCCTTCAATTTTCATCTCCGACCGTACCATCGCTCACCATGCTCTCATTCAAAACTCCTCTGTTTTCTCCGACCGTCCCGAAGCTCTTACCACCGCCAAAATCAATACCAGCAATCAACATAACATCAGTTCTGCTTCATACGGTCCTACATGGCGTACCCTCCGTCGTAATCTTGCTTCAGAGATGCTTCATCCTTCCAAAATCAAATCTTTCTCTGAAATTCGTAACTGGGTCTTGGAAACTCTCATCAACCGTCTCAAATCTGCTTCGGAATCTGCAGATTCTGTTAAGGTTGTTTCTCACTTTCATCATGCTATGTTCTGTTTACTTGTTTTCATGTGTTTTGGTGAAAGAGTTAATGATGAGATAATCAGTGACATCTTGCGTGTACAAAGGAATCTTGTGTTGAGTATTAGGAGATTCAATATTTTGAATTTCTGGCCTAGAGTTACGAGGATTTTGTTGCCTAAACGATGGGAGGAGTTTTTGAAAACGCGTAAGGATCAAGAGGATGTTTTGCTTCCGTTGATAAGAAAGAGGAAGCAAGTTAAGGAGAGTGGATTGAACAATGGTAACAATGTTGTTTCGTATGTGGATACTCTTTTGGAGTTGCAGTTGCCTGAGGAGAAACGTAAGCTGAGTGAAGATGAAATGGTTACTCTTTGTTCCGAGTTTTTGACAGGTGGGACGGATACTACTTCCACTGCTTTGCAGTGGATTATGGCGAATTTGGTGAAGCACCCGGACGTGCAGGGGAGGATTGTGGAGGAGATTAGAGAGGTGATGGGTGGGGATGATAATGGAGACAAGAAGGAAGTGAAAGAAGAAGACTTACATAAGTTTCCGTATCTCAAGTGTGTGGTTTTGGAAGGGTTGAGGCGTCATCCACCGGGGCATTTTGTGTTGCCACATGCAGTGACTGAGGATGTTGTTTTGGATGGTTATTTGGTGCCTAAAAATGGGACAGTGAATTTTTTGGTGGCTGAGATCGGGTGGGATTCTCGTGTTTGGGAGGATCCAATGGAGTTTAAGCCAGAGAGGTTTTGGAAGGATGAAACGTTTGATATTACAGGGACTAAAGAGATAAAGATGATGCCGTTTGGAGCTGGGAGGAGAATTTGTCCGGGATATAATTTAGCTTTGCTTCATTTGGAATATTTTGTGGCTAATTTGGTTTGGAATTTTGATTGGAAGGTTCCGGAAGGTGGACAGGTTGATTTGTCAGAGAAACAAGAGTTCACTATTGTCATGAAAAATCCATTGCAGGTTCATATTTCTCCTAGGGTCTAG 1539 0.4276 MESSSSSWFIALISFCIIFFIRATFSYLTTTTKTTVTLPPGPPYIPIITTLLWLRKSFSQLEPFLKNLHTKYGPIITLRIGSRPSIFISDRTIAHHALIQNSSVFSDRPEALTTAKINTSNQHNISSASYGPTWRTLRRNLASEMLHPSKIKSFSEIRNWVLETLINRLKSASESADSVKVVSHFHHAMFCLLVFMCFGERVNDEIISDILRVQRNLVLSIRRFNILNFWPRVTRILLPKRWEEFLKTRKDQEDVLLPLIRKRKQVKESGLNNGNNVVSYVDTLLELQLPEEKRKLSEDEMVTLCSEFLTGGTDTTSTALQWIMANLVKHPDVQGRIVEEIREVMGGDDNGDKKEVKEEDLHKFPYLKCVVLEGLRRHPPGHFVLPHAVTEDVVLDGYLVPKNGTVNFLVAEIGWDSRVWEDPMEFKPERFWKDETFDITGTKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVWNFDWKVPEGGQVDLSEKQEFTIVMKNPLQVHISPRV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00289 512 Pfam Cytochrome P450 39 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 SUPERFAMILY Cytochrome P450 39 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 504 - -
Trre3g00289 512 Gene3D Cytochrome P450 31 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00289 512 FunFam Cytochrome P450 family protein 32 512 - -
Trre3g00289 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Trre3g00289 512 CDD CYP77_89 71 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00289 Trre-Chr3 1933332 1934870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00289 6 511 Cytochrome P450 AT1G64940 55.447 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00289 K24184 - gmx:100805244 724.546