Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00277 ATGGTAGCACCAAGACCAAACACATTTATGCCGTTTGGAAACGGAGTCCACTCTTGTCCAGGAAGTGAAATGGCTAAGCCTCAGGAATATGTGCATGGCAATCAATTAAGCGGTTCTATTGTTAATAAGATGATTAAATTTGTGTTATCTGCAGGAATCTCTCTGCTAACAACTTCAAGGGGAATATACCGGTTGAGTTGGGTCACATCTTTAATCTTGGTACGCTGGACCTATCTAGCAATAATTTTTCAGGCCATGTCCCAGCTTCAGATGCTCCGATCGTTGTGGTTCTGCTCCTTGCCGGATCTTCGGTTTGCTTCCTTTCTTTCTCATGCTTGCTGGTTGTTTGCGGTCGGTTTTGTTTCATTCGGAGGTCTCCGGCGTCGTCTCCGTTTCTGTGCTTCGCCGGAGTGGTTTTTACTGTCTCCGGCGCCGGTTCGTTTTTCTTCGCCGGAGTGTTCTTGTTGTTCGAAGGGTGCCGATGTTGTGTTGGGGTGGTGTGGTCATATTGGAGGAGGTGAGGTGATTGAGATTCAATTTCTCAGTATTCAATTCAACAAGGGTTTGATTCATATTGTGTAA 582 0.457 MVAPRPNTFMPFGNGVHSCPGSEMAKPQEYVHGNQLSGSIVNKMIKFVLSAGISLLTTSRGIYRLSWVTSLILVRWTYLAIIFQAMSQLQMLRSLWFCSLPDLRFASFLSHACWLFAVGFVSFGGLRRRLRFCASPEWFLLSPAPVRFSSPECSCCSKGADVVLGWCGHIGGGEVIEIQFLSIQFNKGLIHIV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00277 193 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 12 21 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00277 Trre-Chr3 1853653 1861709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00277 2 26 Cytochrome P450 AT4G19230 84.000 1.06e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00277 K09843 - thj:104800678 57.7658