Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00274 ATGAATCCTGCTTCAGAAGTCAAGTTTTGGCAGACAGAAGCAGCAAGCCTGAGACAACAACTGCAGTACTTGCAAGAAAGCCATAGGCAATTGATGGGTGAAGGACTTGCTGGTTTGGGTATTAAAGAACTACAAAATCTGGAAAACCAGCTGGAGATTAGTCTAAAGGGTGTTCGGATGAAAAAGGATCATATTTTGACTAATGAGATTAAAGAACTACACCAAAAGGGAAATCTTGTTCATCAAGAAAATGTACAACTCCATAAGAAGATGGACCTTGTCCAGAAAGAAAATGCAGAGCTACTGAAGAAGGTTTATGAAGCAAGGAGTACAAATGAAGAAAATGCAACAACCAATCTTTCATGCACTATCAGAAACGGATTTGATTTACATGCACCTATCAGTCTCCAGCTAAGCCAGCCACAGCCTCAATACAGTGAACCAGCAGCCAAAGCCATGAAATTAGGGTATTCCCTTAAACTGATGATGTACAACATATAG 501 0.3992 MNPASEVKFWQTEAASLRQQLQYLQESHRQLMGEGLAGLGIKELQNLENQLEISLKGVRMKKDHILTNEIKELHQKGNLVHQENVQLHKKMDLVQKENAELLKKVYEARSTNEENATTNLSCTIRNGFDLHAPISLQLSQPQPQYSEPAAKAMKLGYSLKLMMYNI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00274 166 Coils Coil 7 34 - -
Trre3g00274 166 Coils Coil 84 104 - -
Trre3g00274 166 ProSiteProfiles K-box domain profile. 7 97 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre3g00274 166 Coils Coil 41 61 - -
Trre3g00274 166 Pfam K-box region 5 91 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00274 Trre-Chr3 1822818 1828358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00274 2 157 MADS-box Gene Family AT3G57230 51.250 8.09e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00274 K09264 - gmx:100808145 256.144