Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00273 ATGAAATCTGTTATTGATCGCTATAACAAACAAAAAGAGGAACAACATCAGCTAATGAATCCTGCTTCAGAAGTCAAGTTTTGGCAGACAGAAGCAGCAAGCCTGAGACAACAACTGCAGTACTTGCAAGAAAGCCATAGGCAATTGATGGGTGAAGGACTTGCTGGTTTGGGTATTAAAGAACTACAAAATCTGGAAAACCAGCTGGAGATTAGTCTAAAGGGTGTTCGGATGAAAAAGGATCATATTTTGACTAATGAGATTAAAGAACTACACCAAAAGGGAAATCTTGTTCATCAAGAAAATGTACAACTCCATAAGAAGATGGACCTTGTCCAGAAAGAAAATGCAGAGCTACTGAAGAAGGTTTATGAAGCAAGGAGTACAAATGAAGAAAATGCAACAACCAATCTTTCATGCACTATCAGAAACGGATTTGATTTACATGCACCTATCAGTCTCCAGCTAAGCCAGCCACAGCCTCAATACAGTGAACCAGCAGCCAAAGCCATGAAATTAGGGTATTCCCTTAAACTGATGATGTACAACATATAG 555 0.391 MKSVIDRYNKQKEEQHQLMNPASEVKFWQTEAASLRQQLQYLQESHRQLMGEGLAGLGIKELQNLENQLEISLKGVRMKKDHILTNEIKELHQKGNLVHQENVQLHKKMDLVQKENAELLKKVYEARSTNEENATTNLSCTIRNGFDLHAPISLQLSQPQPQYSEPAAKAMKLGYSLKLMMYNI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00273 184 Coils Coil 102 122 - -
Trre3g00273 184 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre3g00273 184 Pfam K-box region 23 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre3g00273 184 Coils Coil 25 52 - -
Trre3g00273 184 Coils Coil 59 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00273 Trre-Chr3 1822764 1828358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00273 1 175 MADS-box Gene Family AT3G57230 50.838 2.91e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00273 K09264 - gmx:100808145 283.878