Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00240 ATGGTAGGCAAAGCAGCGAGTCAGACAAGATTCCGGGCATTGAAACATTGGAATGGCGTTGAAGGTGAACCAACAATTATTGTTAGAGTGATAGCATGCTTTCAACCGTTACATGATTGTCAGGCCCATGAGTCTTGGCCTTGCCCACAGCATGTGGCTTGGCCATCACATTATTTGGATTGCGATGGCACATTGCCGGATCCTAGTATGTGTGGTCATTCGGCAAATCTGAACCCTAGTGCATGCACTTTTCCTTCTGTCAGTGCATTTCCGGGATTCACAACTCTTGCTACCCCAAGCCTGCAGACCGATCAAACCAATGAAGTGCAAGGGTTCCTTCAGGATCCCAAAACAGAACCATGTTTGAAAGAAACACATACTAGTGGGGCTATGCAAAACACAAATCCTGCATCTTTGCAGAAGAAGTTTATTATTTTTGACCGGTCTGGTAATAAGACAAGGTTGTTTTATAGTCCTATCTTCTCACTTGTTCAGAGTCCAATTGTTGCTACTACACAATTCGCTCAAGTATGTGATGTAAATCTGGATGGACGGGCAACTAATTTTGGTCACAAACATTTTCCGAAATACAGTTTGCCCGAAGAGTCAGATCAGGATCATGTAGTTAACGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTGTTCTGATGATTATGATTCCGATGACAACGACGAGGAGGTAACAAGTACAGGCCATTCTCCATTGGCTAATCAAATGACTTATTTGATACAAGAACAAATCAAGGACACAAAGGAGGATGTTGCTAGCTCTGATTGGCCAATCAAAAGACATAAGTTAATTGACGGTAGGTACACAAGATTACCACCGCCTGTGGACAGTGCTAGTTCAGTAAGACTAAACAAACCATGTGATAGTGTCAGTGATGCCGAGTCAAAGTATTCTGGTTGCGAAATGTATGTTGCCAGGCAAAATGAAGAATATAATTCAGCAGTTGGCGATATGCAATTGAAAAGGGATAAAATCCGTGAAACGTTGAGAATTCTCGAGAACTTAACTCCTGGAGCAAAAGGAAAGCATCCACTGCTAGTCATCGATGAAACTATTGATTACTTAAAAACGTTGATGTCCCAAAGTGCTTTGTTGCATGGTAAGCCTGAACTTAGCAACATGGTTTCTTCTGTTATTCTCATTCTCAAGGTAACCTGGGGTCCCACTTTCCACCCTCCTTTTCATTCTGGATTTTATGGCTTTTGTCCTCTCTTCAAAGTGGCACAAGAAAGTTTCTGA 1287 0.4188 MVGKAASQTRFRALKHWNGVEGEPTIIVRVIACFQPLHDCQAHESWPCPQHVAWPSHYLDCDGTLPDPSMCGHSANLNPSACTFPSVSAFPGFTTLATPSLQTDQTNEVQGFLQDPKTEPCLKETHTSGAMQNTNPASLQKKFIIFDRSGNKTRLFYSPIFSLVQSPIVATTQFAQVCDVNLDGRATNFGHKHFPKYSLPEESDQDHVVNEESEMHEDTEEINALLCSDDYDSDDNDEEVTSTGHSPLANQMTYLIQEQIKDTKEDVASSDWPIKRHKLIDGRYTRLPPPVDSASSVRLNKPCDSVSDAESKYSGCEMYVARQNEEYNSAVGDMQLKRDKIRETLRILENLTPGAKGKHPLLVIDETIDYLKTLMSQSALLHGKPELSNMVSSVILILKVTWGPTFHPPFHSGFYGFCPLFKVAQESF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00240 428 PANTHER TRANSCRIPTION FACTOR BHLH145 46 377 IPR037546 -
Trre3g00240 428 MobiDBLite consensus disorder prediction 228 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00240 Trre-Chr3 1571978 1573967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00240 129 403 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G64340 37.143 5.68e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00240 - - gmx:100778385 428.713