Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00231 ATGGAGAGCTTTGCACTTCACTCGCTCTCCACACCTTCTTCAACCTCATTCTTAATCCATCATTATCATCGTCCACGACCCATTTTCAGATCTCAACTCTCTCTTCCATTGAATCCATCTTCACGTTCAAACCCATCAATTAAATCATCACCAATCTCTCAATCTTTCTCTTTTCCCTCCAAAGTTTCAACCTTTAACCATTTCTCAAAACCCCATTTCCCAATTCATGCTAATTCAACTCCACCACCATCATCAGAATCAAAACCCCAACAACCCAATATTCTTCAAGGTGCAAAGCCAATTCCTTTTGTTATTTCAATAGCCATAGGTCTCATTGTTCGTTTCTATGTTCCAAAACCAATTGATGTTACTCCTCAAGCATGGCAATTGCTTTCCATTTTCCTTTCAACAATTGCAGGCCTTGTTCTAAGCCCTTTACCTGTTGGTGCTTGGGCTTTTCTGGGCCTGACTACATCTGTGGTCACAAAAACTTTAACCTTTACTGATGCATTTAGTGCTTTTACAAATGAAGTTATTTGGTTGATTGTTATATCGTTTTTCTTTGCGCGCGGATTTGTTAAAACCGGTTTAGGTGATAGAATTGCTACTTATTTTGTGAAATGGCTGGGAAAGAGTACTTTGGGACTTGCTTATGGTTTGACATTTAGTGAGGTTCTTATTGCACCTGCTATGCCTAGTACTACTGCAAGAGCTGGTGGTGTTTTCTTGCCAATTATTAAGTCACTTTCACTCTCTGCTGGTAGTGAACCTAATGGTCCTACCTCTAAGAGGTTGGGGGCTTTTCTTATTCAGAACCAATTTCAGTCTGCCGGTAACTCAAGCGCTCTTTTCCTAACCGCTGCTGCTCAAAATCTGCTCTGTATTAAATTAGCACAGGAGCTTGGGGTGGTAATTTCAAACCCTTGGGTTACGTGGTTTAAGGCAGCTAGTGTACCTGCATTTATTTGTCTTCTCGCTACACCATTGATTTTATACAAGATCTATCCCCCAGAAATTAAAGATACACCAGAGGCACCTGCCTTGGCTGCAAAGAAACTGGAAAGTATGGGTCCTGTCACTCTAAATGAATGGGTTATGGTTGCTACTATGCTTCTTGCAGTCTCTTTGTGGATCTTTGGAGAGACTCTTGGAATAGCAAGTGCTGTAGCTGCAATGATTGGTTTATCAATACTCCTCGTATTAGGAGTCCTTGACTGGCAAGACTGCTTGAATGAAAAATCGGCGTGGGATACCTTGGCTTGGTTTGCCATTCTAGTAGGTATGGCAAGTCAGTTGACAAACCTTGGCATTGTGACCTGGATGTCTGATTGTGTGGCCAATAACCTTCGGTCATTCTCCTTGAGCTGGCCAGCTTCCCTGGCTGTTCTTCAGGCTGCTTATTTCTTCATCCACTACCTTTTTGCAAGCCAGACTGGGCATGTTGGGGCTTTATACTCCGCATTTCTTGCCATGCATAGAGCAGCCGGTGTTCCTGGTGCTCTCGCAGCGCTTGCTTTAGGATATAATACAAATCTTTTCGGTGCAATTACACATTATAGCAGTGGTCAAGCTGCTGTATACTATGGAGCCGGCTATGTAGACCTTCCCGATATATTCAAAACGGGGTTCATTATGGCATTTATTAATGCTATCATCTGGGGAGGAGTTGGCTCGGTCTGGTGGAAATTTTTGGGCTTGTATTGA 1704 0.4266 MESFALHSLSTPSSTSFLIHHYHRPRPIFRSQLSLPLNPSSRSNPSIKSSPISQSFSFPSKVSTFNHFSKPHFPIHANSTPPPSSESKPQQPNILQGAKPIPFVISIAIGLIVRFYVPKPIDVTPQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTTSVVTKTLTFTDAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWLGKSTLGLAYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPNGPTSKRLGAFLIQNQFQSAGNSSALFLTAAAQNLLCIKLAQELGVVISNPWVTWFKAASVPAFICLLATPLILYKIYPPEIKDTPEAPALAAKKLESMGPVTLNEWVMVATMLLAVSLWIFGETLGIASAVAAMIGLSILLVLGVLDWQDCLNEKSAWDTLAWFAILVGMASQLTNLGIVTWMSDCVANNLRSFSLSWPASLAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGALAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFKTGFIMAFINAIIWGGVGSVWWKFLGLY 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00231 567 NCBIfam DASS family sodium-coupled anion symporter 119 561 IPR001898 GO:0016020|GO:0022857|GO:0055085
Trre3g00231 567 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 66 567 IPR030676 -
Trre3g00231 567 Pfam Sodium:sulfate symporter transmembrane region 103 566 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00231 Trre-Chr3 1523049 1526768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00231 1 567 Antiporters AT5G64290 74.869 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00231 - - gmx:100782873 902.894