Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00202 ATGTCGGAGGAAAGTGGTGAAATCAATGGCGGATTCTCGATGGACTCATCGGAATCACGATGGGTTTTTCACGAGGATGAAGATGAGGACGTGTCCGATATAGAGGAGTACCAAGCCGATTTGAGATTCAGAGGACGCGCCACTGTACCTGATTCCGAAGATGAAGATAACGCTGAACAAAAACTCATTCGCACTGGTCCTCGAATCGATTCTTTTGATGTTGAAGCTCTTGAGATTCCTGGTGCTCACAGAAATGACTATGAGGATATCAGTGTAGGAAAGAAAATTATATTGGCTTTTCAGACTCTTGGCGTAGTCTTTGGTGATGTTGGAACCAGTCCATTATATACATTCAGTGTTATGTTTAGAAAGGCTCCTATAAATGAAAATGAAGACATTATTGGAGCATTATCACTTGTCTTGTATACTTTAATCTTGATTCCTTTGGTGAAGTATATCCTGGTTGTTCTGTGGGCCAATGATAATGGTGAAGGTGGTACTTTTGCCTTGTACTCCTTGATTTGTCGGCATGCTAAGGTGAGTCTTCTCCCCAACCAGTTAGCATCAGATGCCCGTATATCAAGCTTTAGGCTAAAGGTGCCATCCCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGACTCGAGTCTTCTCTGACTCTGAAGAAGACGCTACTGATATTAGTGCTTGCTGGTACTTCTATGGTGATTGCTAATGGTGTTGTAACACCAGCAATGTCAGTATTGTCATCTGTTGGTGGTTTAAACGTTGGGATAGATGCAATCAAGAAAGATGAAGTGGTGATGATATCAGTTGCCTGCCTGATTGTTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGACTTGCAGTAGGACCTGCTTTGTTCATATGGTTTTGTTCTCTGGCGGGTATCGGGATATACAATCTTGTCAAATATGACAGGAGTGTCTTGAGGGCATTTAATCCTATTCATATCTACTATTTCTTCAAGAGGAACTCAACTAAAGCATGGTATTCTCTTGGGGGTTGTCTTCTGTGTGCAACAGGTTCTGAAGCCATGTTTGCAGATCTTTGCTACTTTTCTGTACGATCAGTGCAGCTTACGTTTGTCTTTCTTGTTTTGCCGTGCCTGCTATTGGGCTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAAGCCTTTTATTCTTCTGTTCCGAGTGGTGCATTCTGGCCAACTTTCCTTATTGCTAACATTGCGGCACTGATCGCAAGTCGTGCTATGACAACAGCAACATTTTCATGTATAAAGCAATCAACTGCACTTGGTTGTTTCCCTCGTCTTAAAATCATTCACACCTCCCGGAAATTTATGGGCCAGATCTATATCCCTGTCCTAAACTGGTTTCTACTGGCTGCTTCGCTGGTGCTTGTCTGCTCTATATCAAGCATTGATGAGATTGGAAATGCCTATGGAATTGCTGAGATGGGTGTGATGATGACGACCACTGTTTTATTAACCCTTGTTATGCTTCTTATATGGCAAATACGCATCATCATAGTGCTGTGTTTTGCGGTAGTCTTCTTGGGATTGGAGTTGACTTTCTTTTCATCTGTTCTGTGGAGTGTGGCAGATGGAAGTTGGATAATATTGGTCTTTTCCATAATAATGTTTCTTATAATGTATGTATGGAATTATGGAAGCAATCTCAAGTATGAAACCGAAGTCAAGCAAAAACTGTCGATGAATTTGATGCGAGAATTAGGGTCTAATCTTGGGACAATACGTGCTCCTGGAATTGGTTTGCTTTATAACGAACTGGTCAAAGGAATACCAGCAATTCTTGGACATTTTCTGACTACACTTCCGGCAATTCACTCCATGATCATATTTGTGAGTATCAAGTATGTTCCGGTTCCTGTGGTGCCTCAAAGTGAAAGGTTCCTTTTCCGGCGAGTCTGCCTCAAAAGTTATCATATATTTCGTTGTATTGCCAGATATGGTTACAAAGATGTTCGAAAAGAAAATCACCAGACTTTTGAGCAGATGCTGATTGAGAGCCTAGAGAAGTTTATACGCCGTGAGGCTCAGGAAAGATCACTAGAGAGTGATAGGGATGAAGATATCGATTCAGAGGATGAGTATTCTAGTTCTAGGGTTCTAATTGGTCCCAATGGGAGTGTTTACTCACTTGGGATTCCTCTTCTTGCCGATTTTAAGGATACAAGCAGCTCTGTTTTAGAAGCAAGTACATCTGAGGTGTTAAGCCCTACAGCCTCTGATTCCCCAGCGTTTGATGCGGAGCAGAGCCTTGAGAGGGAGCTATCTTTTATTCACAAGGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCATGGGGATATAAGAGCACGAAAGGAGTCTTGGTTTATTAAGAAGCTAGTAATAAACTATTTCTACGCCTTCTTGAGAAAGAACTGCAGGAGGGGGATCACAACTTTAAGTGTGCCCCATTCACATCTGATGCAAGTTAGCATGACTTACATGGTTTGA 2535 0.4178 MSEESGEINGGFSMDSSESRWVFHEDEDEDVSDIEEYQADLRFRGRATVPDSEDEDNAEQKLIRTGPRIDSFDVEALEIPGAHRNDYEDISVGKKIILAFQTLGVVFGDVGTSPLYTFSVMFRKAPINENEDIIGALSLVLYTLILIPLVKYILVVLWANDNGEGGTFALYSLICRHAKVSLLPNQLASDARISSFRLKVPSPELERSLKIKERLESSLTLKKTLLILVLAGTSMVIANGVVTPAMSVLSSVGGLNVGIDAIKKDEVVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDRSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGQAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAASLVLVCSISSIDEIGNAYGIAEMGVMMTTTVLLTLVMLLIWQIRIIIVLCFAVVFLGLELTFFSSVLWSVADGSWIILVFSIIMFLIMYVWNYGSNLKYETEVKQKLSMNLMRELGSNLGTIRAPGIGLLYNELVKGIPAILGHFLTTLPAIHSMIIFVSIKYVPVPVVPQSERFLFRRVCLKSYHIFRCIARYGYKDVRKENHQTFEQMLIESLEKFIRREAQERSLESDRDEDIDSEDEYSSSRVLIGPNGSVYSLGIPLLADFKDTSSSVLEASTSEVLSPTASDSPAFDAEQSLERELSFIHKAKESGVVYLLGHGDIRARKESWFIKKLVINYFYAFLRKNCRRGITTLSVPHSHLMQVSMTYMV 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00202 844 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 94 842 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre3g00202 844 MobiDBLite consensus disorder prediction 1 31 - -
Trre3g00202 844 NCBIfam potassium uptake protein 98 843 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre3g00202 844 MobiDBLite consensus disorder prediction 1 16 - -
Trre3g00202 844 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00202 Trre-Chr3 1358250 1364748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00202 3 844 Inorganic Solute Cotransporters AT5G09400 77.203 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00202 - - gmx:100788190 1428.69