Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00195 ATGGAGGGTAGTTTGTTTAAGGTTGTGTTTCTTTTGATTGTGTTGGGTCTTGTGAACACACTAGTGCATGGCCAAGGGACACGTGTAGGATTCTATACGAGTACATGTTCTCAAGCTGAATCCATTGTTAAGTCCACAGTTGCATCTCATATTAACTCTGATTCTTCTTTGGCTGCTGGCTTACTTAGGATGCATTTTCATGATTGCTTTGTCCAAGGTTGTGATGGCTCGGTTCTCATTACCGGCTCCGGCACCGAAAAAACTGCATTGCCAAACCTTGGTTTAAGAGGTTTTGAAGTTATTGATGATGCAAAGACAAAGCTCGAGACTGCATGCCCTGGAGTCGTCTCTTGTGCAGATATTGTTGCCCTTGCTGCTCGTGATTCCGTTGTTTTGAGTGGTGGATTGAGTTGGCAAGTGCCCACCGGACGTAGAGACGGACGTGTGTCACAGGCTTCCGATGCCAATAATTTGCCCGGTCCTAATGATTCTGTTGATGTGCAAAAACAAAAATTTACAGCAAAGGGCCTTAACACTCAAGACCTTGTCACCTTAGTTGGTGGACATACAATTGGTACTACCGCATGTCAATTCTTCAGTAGTAGATTGTACAACTTTAATACAACTGGTGCTGCTGACCCTTCCATCGACCCTACATTTCTTTCACAATTACAGACACTATGCCCTCAAAACAGTGGTGCTACAAACAGAGCAATCTTCAACACATTTGATACTGGAAGTCAAAACAAATTTGATAATTCTTACTATGCTAATTTGAGGAACGGGCGTGGAATTCTTCCATCAGATCAAGCATTGTGGAATGATGCTTCCACAAAAACCTTTGTTCAAAGGTACTTAGGTTTAAGAGGGTTACTTGGATTAACATTTAATGTTGAATTTGGAAGATCCATGGTGAAGATGAGCAACATTGGAGTTAAGACTGGTACTGATGGTGAAATTCGCAAGATATGTTCTGCTTTCAACTAA 987 0.4195 MEGSLFKVVFLLIVLGLVNTLVHGQGTRVGFYTSTCSQAESIVKSTVASHINSDSSLAAGLLRMHFHDCFVQGCDGSVLITGSGTEKTALPNLGLRGFEVIDDAKTKLETACPGVVSCADIVALAARDSVVLSGGLSWQVPTGRRDGRVSQASDANNLPGPNDSVDVQKQKFTAKGLNTQDLVTLVGGHTIGTTACQFFSSRLYNFNTTGAADPSIDPTFLSQLQTLCPQNSGATNRAIFNTFDTGSQNKFDNSYYANLRNGRGILPSDQALWNDASTKTFVQRYLGLRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAFN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00195 328 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 MobiDBLite consensus disorder prediction 144 164 - -
Trre3g00195 328 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 CDD secretory_peroxidase 28 327 IPR033905 GO:0004601|GO:0042744
Trre3g00195 328 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PANTHER PEROXIDASE 25-RELATED 14 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 FunFam Peroxidase 30 171 - -
Trre3g00195 328 Gene3D Peroxidase, domain 2 159 307 - -
Trre3g00195 328 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g00195 328 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trre3g00195 328 FunFam Peroxidase 159 307 - -
Trre3g00195 328 Gene3D - 30 328 - -
Trre3g00195 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Trre3g00195 328 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00195 Trre-Chr3 1305653 1310044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00195 8 328 Peroxidase AT2G41480 60.870 1.08e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00195 K00430 - gmx:100820620 498.819