Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00186 ATGGAGGAAATAAAAAGCAATCCTACTTCACGTAGACATGGTGATGATATTCTTCGTCCACATATTCACAAAGTTTCAAGTCCTCCTAAGCAGACACTTTTCCAAGATATCAAGCATAATTTCAATGAAACTTTTTTCCCTGATGACCCTTTTGGCAAGTTTAAGAATCAAACAGTATCAAGAAAGTTTGTTCTTGGATTACAATCTGTTTTTCCAATTTTTGATTGGGCAAGAGGTTACAACCTTAAAAGTTTTAAGGGTGATTTGATTTCTGGACTCACCATTGCTAGTCTTTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCACATTTGGAGCCTCAATATGGACTGTATACTAGTTTTGTTGCACCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATCGCCATAGGACCAGTAGCTGTGGTGTCCCTCTTGCTTGGAACCTTGCTTTCCGATGAGATCAAAGACACCAAAAGTCATGAATATCTGCGTCTCACATTTACCGCAACTTTCTTTGCAGGAATCACACAAATGGCACTTGGACTTTTAAGGCTTGGTTTCTTGATTGATTTTCTATCTCATGCTGCAATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTCCAACAACTTAAAGGTCTTCTTGGCGTAAAGGACTTCACTACGAAAACTGATATTATTTCTGTCATGAGATCCATTTTTAATGCCGCCCACCATGGGTGGAATTGGCAGACAATAGTAATTGGACTATCATTCTTGGCTTTCCTTCTTACAACCAAATATATTGCTAAGAAGAACAAGAAACTCTTTTGGGTGGCTGCAATATCTCCTATGATATGTGTTATAGTGTCTACTTTTTCTGTCTACATTACAAGAGCAGACAAAAAAGGAGTAGCAATTGTGAAACATATCGACAGACATGTGAATCCAGCATCTGCTAGTGAAATATATTTCAGTGGAAATTATTTAAGTGCTGGTATTAGAATTGGTGTGATTGCTGGTATGGTAGCACTCACGGAAGCTGTGGCCATTGGAAGAACATTTGCTGCTATGAAAGACTATTCAATTGATGGTAACAGAGAAATGGTGGCACTAGGAACAATGAATGTTGTTGGTTCTTTGACATCTTGTTATGTTGCTACAGGATCTTTTTCGCGCTCAGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCATGGTGTTGTTGTTAACTTTGTTAGTGATTACACCGCTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATCATAGCTGCTGTGTTGAATCTCATTGACATTAAAGCAGCTATTCTTCTTTGGAAGATTGACAAATTTGATTTTCTAGCTTGCATGGGAGCCTTCTTTGGCGTCATCTTCAAAAGTGTCGAGATTGGCCTTCTAATCGCGGTAGCAATATCTTTCGCGAAAATCCTTTTACAAGTCACAAGGCCAAGGACTGTAGTACTTGGGAAGCTTTCAGGGACAACTGTTTATAGGAACATCTTGCAATATCCCAAAGCAGAACAGATTCCTGGCATGCTGATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAATTCCAACTACATCAAGGACAGAATATTGAAGTGGCTGACTGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGTATTCAGTATCTCATTGTTGAAATGTCGCCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGAAGATTTACTTAAAAGCCTCAAAAAGAGAGATGTTCAGCTTCTCTTGGCAAATCCGGGACCAATTGTAATCGAAAAGCTACATGCATCAAAGGTATCAGACTTAATAGGGGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTGCAGCATTTGGTCCAAAGGGTGCAGATTCATGA 1941 0.3916 MEEIKSNPTSRRHGDDILRPHIHKVSSPPKQTLFQDIKHNFNETFFPDDPFGKFKNQTVSRKFVLGLQSVFPIFDWARGYNLKSFKGDLISGLTIASLCIPQDIAYAKLAHLEPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLSDEIKDTKSHEYLRLTFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGVKDFTTKTDIISVMRSIFNAAHHGWNWQTIVIGLSFLAFLLTTKYIAKKNKKLFWVAAISPMICVIVSTFSVYITRADKKGVAIVKHIDRHVNPASASEIYFSGNYLSAGIRIGVIAGMVALTEAVAIGRTFAAMKDYSIDGNREMVALGTMNVVGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSMVLLLTLLVITPLFKYTPNAVLASIIIAAVLNLIDIKAAILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTVVLGKLSGTTVYRNILQYPKAEQIPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEILRTSSEYPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKRDVQLLLANPGPIVIEKLHASKVSDLIGEDKIFLTVGDAVAAFGPKGADS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00186 646 MobiDBLite consensus disorder prediction 1 21 - -
Trre3g00186 646 Pfam Sulfate permease family 85 464 IPR011547 GO:0016020
Trre3g00186 646 CDD STAS_SulP_like_sulfate_transporter 517 632 - -
Trre3g00186 646 Gene3D STAS domain 496 641 IPR036513 -
Trre3g00186 646 NCBIfam sulfate permease 72 635 IPR001902 GO:0016020|GO:0055085
Trre3g00186 646 SUPERFAMILY SpoIIaa-like 518 640 IPR036513 -
Trre3g00186 646 FunFam Sulfate transporter 31 496 642 - -
Trre3g00186 646 PANTHER SULFATE TRANSPORTER 32 638 IPR001902 GO:0016020|GO:0055085
Trre3g00186 646 Pfam STAS domain 517 635 IPR002645 -
Trre3g00186 646 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Trre3g00186 646 ProSiteProfiles STAS domain profile. 516 639 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00186 Trre-Chr3 1258486 1262222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00186 7 646 Inorganic Solute Cotransporters AT1G22150 70.983 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00186 K17470 - gmx:100784124 1031.55