Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00185 ATGGAAATGGAGGAAATAAAAAGCAATCCTACTTCACGTAGACATGGTGATGATATTCTTCGTCCACATATTCACAAAGTTTCAAGTCCTCCTAAGCAGACACTTTTCCAAGATATCAAGCATAATTTCAATGAAACTTTTTTCCCTGATGACCCTTTTGGCAAGTTTAAGAATCAAACAGTATCAAGAAAGTTTGTTCTTGGATTACAATCTGTTTTTCCAATTTTTGATTGGGCAAGAGGTTACAACCTTAAAAGTTTTAAGGGTGATTTGATTTCTGGACTCACCATTGCTAGTCTTTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCACATTTGGAGCCTCAATATGGACTGTATACTAGTTTTGTTGCACCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATCGCCATAGGACCAGTAGCTGTGGTGTCCCTCTTGCTTGGAACCTTGCTTTCCGATGAGATCAAAGACACCAAAAGTCATGAATATCTGCGTCTCACATTTACCGCAACTTTCTTTGCAGGAATCACACAAATGGCACTTGGACTTTTAAGGCTTGGTTTCTTGATTGATTTTCTATCTCATGCTGCAATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTCCAACAACTTAAAGGTCTTCTTGGCGTAAAGGACTTCACTACGAAAACTGATATTATTTCTGTCATGAGATCCATTTTTAATGCCGCCCACCATGGGGCTAAGAAGAACAAGAAACTCTTTTGGGTGGCTGCAATATCTCCTATGATATGTGTTATAGTGTCTACTTTTTCTGTCTACATTACAAGAGCAGACAAAAAAGGAGTAGCAATTGTGAAACATATCGACAGACATGTGAATCCAGCATCTGCTAGTGAAATATATTTCAGTGGAAATTATTTAAGTGCTGGTATTAGAATTGGTGTGATTGCTGGTATGGTAGCACTCACGGAAGCTGTGGCCATTGGAAGAACATTTGCTGCTATGAAAGACTATTCAATTGATGGTAACAGAGAAATGGTGGCACTAGGAACAATGAATGTTGTTGGTTCTTTGACATCTTGTTATGTTGCTACAGGATCTTTTTCGCGCTCAGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCATGGTGTTGTTGTTAACTTTGTTAGTGATTACACCGCTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATCATAGCTGCTGTGTTGAATCTCATTGACATTAAAGCAGCTATTCTTCTTTGGAAGATTGACAAATTTGATTTTCTAGCTTGCATGGGAGCCTTCTTTGGCGTCATCTTCAAAAGTGTCGAGATTGGCCTTCTAATCGCGGTAGCAATATCTTTCGCGAAAATCCTTTTACAAGTCACAAGGCCAAGGACTGTAGTACTTGGGAAGCTTTCAGGGACAACTGTTTATAGGAACATCTTGCAATATCCCAAAGCAGAACAGATTCCTGGCATGCTGATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAATTCCAACTACATCAAGGACAGAATATTGAAGTGGCTGACTGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGTATTCAGTATCTCATTGTTGAAATGTCGCCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGAAGATTTACTTAAAAGCCTCAAAAAGAGAGATGTTCAGCTTCTCTTGGCAAATCCGGGACCAATTGTAATCGAAAAGCTACATGCATCAAAGGTATCAGACTTAATAGGGGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTGCAGCATTTGGTCCAAAGGGTGCAGATTCATGA 1881 0.3934 MEMEEIKSNPTSRRHGDDILRPHIHKVSSPPKQTLFQDIKHNFNETFFPDDPFGKFKNQTVSRKFVLGLQSVFPIFDWARGYNLKSFKGDLISGLTIASLCIPQDIAYAKLAHLEPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLSDEIKDTKSHEYLRLTFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGVKDFTTKTDIISVMRSIFNAAHHGAKKNKKLFWVAAISPMICVIVSTFSVYITRADKKGVAIVKHIDRHVNPASASEIYFSGNYLSAGIRIGVIAGMVALTEAVAIGRTFAAMKDYSIDGNREMVALGTMNVVGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSMVLLLTLLVITPLFKYTPNAVLASIIIAAVLNLIDIKAAILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTVVLGKLSGTTVYRNILQYPKAEQIPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEILRTSSEYPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKRDVQLLLANPGPIVIEKLHASKVSDLIGEDKIFLTVGDAVAAFGPKGADS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00185 626 ProSiteProfiles STAS domain profile. 496 619 IPR002645 -
Trre3g00185 626 PANTHER SULFATE TRANSPORTER 34 618 IPR001902 GO:0016020|GO:0055085
Trre3g00185 626 FunFam Sulfate transporter 31 476 622 - -
Trre3g00185 626 CDD STAS_SulP_like_sulfate_transporter 497 612 - -
Trre3g00185 626 Pfam Sulfate permease family 87 444 IPR011547 GO:0016020
Trre3g00185 626 NCBIfam sulfate permease 247 615 IPR001902 GO:0016020|GO:0055085
Trre3g00185 626 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Trre3g00185 626 SUPERFAMILY SpoIIaa-like 498 620 IPR036513 -
Trre3g00185 626 MobiDBLite consensus disorder prediction 1 23 - -
Trre3g00185 626 Pfam STAS domain 497 615 IPR002645 -
Trre3g00185 626 Gene3D STAS domain 476 621 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00185 Trre-Chr3 1258480 1262222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00185 9 626 Inorganic Solute Cotransporters AT1G22150 68.643 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00185 K17470 - gmx:100784124 976.081