Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00184 ATGGAAATGGAGGAAATAAAAAGCAATCCTACTTCACGTAGACATGGTGATGATATTCTTCGTCCACATATTCACAAAGTTTCAAGTCCTCCTAAGCAGACACTTTTCCAAGATATCAAGCATAATTTCAATGAAACTTTTTTCCCTGATGACCCTTTTGGCAAGTTTAAGAATCAAACAGTATCAAGAAAGTTTGTTCTTGGATTACAATCTGTTTTTCCAATTTTTGATTGGGCAAGAGGTTACAACCTTAAAAGTTTTAAGGGTGATTTGATTTCTGGACTCACCATTGCTAGTCTTTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCACATTTGGAGCCTCAATATGGACTGTATACTAGTTTTGTTGCACCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATCGCCATAGGACCAGTAGCTGTGGTGTCCCTCTTGCTTGGAACCTTGCTTTCCGATGAGATCAAAGACACCAAAAGTCATGAATATCTGCGTCTCACATTTACCGCAACTTTCTTTGCAGGAATCACACAAATGGCACTTGGACTTTTAAGGCTTGGTTTCTTGATTGATTTTCTATCTCATGCTGCAATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTCCAACAACTTAAAGGTCTTCTTGGCGTAAAGGACTTCACTACGAAAACTGATATTATTTCTGTCATGAGATCCATTTTTAATGCCGCCCACCATGGGTGGAATTGGCAGACAATAGTAATTGGACTATCATTCTTGGCTTTCCTTCTTACAACCAAATATATTGCTAAGAAGAACAAGAAACTCTTTTGGGTGGCTGCAATATCTCCTATGATATGTGTTATAGTGTCTACTTTTTCTGTCTACATTACAAGAGCAGACAAAAAAGGAGTAGCAATTGTGAAACATATCGACAGACATGTGAATCCAGCATCTGCTAGTGAAATATATTTCAGTGGAAATTATTTAAGTGCTGGTATTAGAATTGGTGTGATTGCTGGTATGGTAGCACTCACGGAAGCTGTGGCCATTGGAAGAACATTTGCTGCTATGAAAGACTATTCAATTGATGGTAACAGAGAAATGGTGGCACTAGGAACAATGAATGTTGTTGGTTCTTTGACATCTTGTTATGTTGCTACAGGATCTTTTTCGCGCTCAGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCATGGTGTTGTTGTTAACTTTGTTAGTGATTACACCGCTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATCATAGCTGCTGTGTTGAATCTCATTGACATTAAAGCAGCTATTCTTCTTTGGAAGATTGACAAATTTGATTTTCTAGCTTGCATGGGAGCCTTCTTTGGCGTCATCTTCAAAAGTGTCGAGATTGGCCTTCTAATCGCGGTAGCAATATCTTTCGCGAAAATCCTTTTACAAGTCACAAGGCCAAGGACTGTAGTACTTGGGAAGCTTTCAGGGACAACTGTTTATAGGAACATCTTGCAATATCCCAAAGCAGAACAGATTCCTGGCATGCTGATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAATTCCAACTACATCAAGGACAGAATATTGAAGTGGCTGACTGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGTATTCAGTATCTCATTGTTGAAATGTCGCCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGAAGATTTACTTAAAAGCCTCAAAAAGAGAGATGTTCAGCTTCTCTTGGCAAATCCGGGACCAATTGTAATCGAAAAGCTACATGCATCAAAGGTATCAGACTTAATAGGGGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTGCAGCATTTGGTCCAAAGGGTGCAGATTCATGA 1947 0.3914 MEMEEIKSNPTSRRHGDDILRPHIHKVSSPPKQTLFQDIKHNFNETFFPDDPFGKFKNQTVSRKFVLGLQSVFPIFDWARGYNLKSFKGDLISGLTIASLCIPQDIAYAKLAHLEPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLSDEIKDTKSHEYLRLTFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGVKDFTTKTDIISVMRSIFNAAHHGWNWQTIVIGLSFLAFLLTTKYIAKKNKKLFWVAAISPMICVIVSTFSVYITRADKKGVAIVKHIDRHVNPASASEIYFSGNYLSAGIRIGVIAGMVALTEAVAIGRTFAAMKDYSIDGNREMVALGTMNVVGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSMVLLLTLLVITPLFKYTPNAVLASIIIAAVLNLIDIKAAILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTVVLGKLSGTTVYRNILQYPKAEQIPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEILRTSSEYPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKRDVQLLLANPGPIVIEKLHASKVSDLIGEDKIFLTVGDAVAAFGPKGADS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00184 648 Gene3D STAS domain 498 643 IPR036513 -
Trre3g00184 648 ProSiteProfiles STAS domain profile. 518 641 IPR002645 -
Trre3g00184 648 Pfam STAS domain 519 637 IPR002645 -
Trre3g00184 648 CDD STAS_SulP_like_sulfate_transporter 519 634 - -
Trre3g00184 648 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Trre3g00184 648 NCBIfam sulfate permease 74 637 IPR001902 GO:0016020|GO:0055085
Trre3g00184 648 SUPERFAMILY SpoIIaa-like 520 642 IPR036513 -
Trre3g00184 648 MobiDBLite consensus disorder prediction 1 23 - -
Trre3g00184 648 PANTHER SULFATE TRANSPORTER 34 640 IPR001902 GO:0016020|GO:0055085
Trre3g00184 648 FunFam Sulfate transporter 31 498 644 - -
Trre3g00184 648 Pfam Sulfate permease family 87 466 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00184 Trre-Chr3 1258480 1262222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00184 9 648 Inorganic Solute Cotransporters AT1G22150 70.983 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00184 K17470 - gmx:100784124 1032.32