Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00154 ATGGATCATGAAGGGGATGCAAACAGAACTGATTTGATGACAATAACAAGGTTTGTTCTGAATGAGCAATCAAAGTATGCTGAGTCACGTGGTGATTTCACCATCCTCATCAGTCACATTGTTCTCGGCTGCAAATTTGTTTGCTCTTCCGTTAACAAGGCAGGATTGGCAAAAATCCTAGGACTTGCCGGAGACACCAATGTTCAGGGCGAGGAGCAAAAGAAATTGGATGTGATTTCTAATGAAGTATTTGTGAAGGCCTTAATTAGCAGTGGACGCACTTGCCTTCTTGTTTCTGAAGAGAATGAAGATGCTATCATTGTGCCACCAGCACAGCGTGGCAAATACATTGTTGTGTTTGATCCTTTGGATGGCTCCTCAAACATTGATTGTGGTGTTTCAATAGGAACCATCTTTGGTATTTACATGGTGAAGGATACAAATAATGTTTCCATTGAAGATGCATTGCAACCTGGAAGCAGTTTAATAGCAGCTGGTTACTGCATGTATGGCAGCTCTTGCACGTTTGTGCTTAGCACAGGTAATGGAGTGAATGGTTTTACACTTGATCCTTCCCTTGGAGAGTTCATATTGACTCATCCAAACATTAAGATACCAAAGAAAGGAAAGATCTATTCAGTGAATGAGGGAAATGCCAAAAACTGGGATGAACCAACCACCAAATATGTTGCAAGTTGCAAGTTTCCACAAGATGGTTCATCACCAAAATCTCTTAGATACATTGGCAGTATGGTAGCTGATATACATCGGACATTGCTATATGGCGGTATCTTCATGTATCCTGCTGATATTAAAAACCTAAATGGAAAGCTAAGGGTTCTGTATGAAGTCTTTCCAATGTCATATTTGATGGAGCAAGCTGGAGGTCAAGCTTTCACAGGAAAACAAAGGGCACTTGACTTGGTTCCGGAGAAAATACATGATCGATCGCCAATATTCCTTGGAAGCTACGATGAAATTGAGCAAATGAAAGAGCTTTATGCTGAATCCAAAGCAAATGGTGCATGA 1029 0.4082 MDHEGDANRTDLMTITRFVLNEQSKYAESRGDFTILISHIVLGCKFVCSSVNKAGLAKILGLAGDTNVQGEEQKKLDVISNEVFVKALISSGRTCLLVSEENEDAIIVPPAQRGKYIVVFDPLDGSSNIDCGVSIGTIFGIYMVKDTNNVSIEDALQPGSSLIAAGYCMYGSSCTFVLSTGNGVNGFTLDPSLGEFILTHPNIKIPKKGKIYSVNEGNAKNWDEPTTKYVASCKFPQDGSSPKSLRYIGSMVADIHRTLLYGGIFMYPADIKNLNGKLRVLYEVFPMSYLMEQAGGQAFTGKQRALDLVPEKIHDRSPIFLGSYDEIEQMKELYAESKANGA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00154 342 PIRSF FBPtase 9 339 IPR028343 GO:0042132
Trre3g00154 342 SUPERFAMILY Carbohydrate phosphatase 9 334 - -
Trre3g00154 342 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Trre3g00154 342 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Trre3g00154 342 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Trre3g00154 342 Gene3D - 204 342 - -
Trre3g00154 342 PIRSF FBPtase_SBPase 9 340 IPR000146 GO:0005975|GO:0016791
Trre3g00154 342 FunFam Fructose-1,6-bisphosphatase class 1 204 338 - -
Trre3g00154 342 Gene3D - 4 203 - -
Trre3g00154 342 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Trre3g00154 342 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Trre3g00154 342 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Trre3g00154 342 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Trre3g00154 342 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Trre3g00154 342 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Trre3g00154 342 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Trre3g00154 342 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Trre3g00154 342 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Trre3g00154 342 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 4 336 IPR000146 GO:0005975|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00154 Trre-Chr3 1071387 1074825 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Trre3g00154 FBPase 4.6e-78 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00154 K03841 - gmx:100797157 612.838