Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00151 ATGATGGAGAAGTTGTGCAGTGTAATGCATGGTTTGAAGCCAACTTTGTTAATGATAATGGTGCAAATAACATTTGCTGGTGTTAATCTTCTTTACAAGCTTGCTGTTAATGATGGCATGAACTTAAGGATTGTTGTTGCCTACCGTTTTATATTCGCAACTGCTTTCATTGCTCCACTTGCTTTCTTTCTTGAAAGGAAGAAGAGGGCAAAGATGACTTGGACGATACTGTTTCAGTCTTTTCTCTGCGGTTTGTTTGGAGGAGCATTAGCTCAAAACTTCCACTTAGAAGCCATGTCTTTAACTTCGGTAACATTTACATCCGCAATGGCCAACCTTGTACCAGCTGTAACCTTTATCATGGCTGTTTCCTTAGGTATGGAAAAATTAAATTTGAGAACAAAAGCAGGGAAGGCAAAGATAATAGGCACAGTGACTGGAATTGGTGGGGCAATGGTATTAACATTTGTTAAAGGAATTGAAATCAAGATTGGTTCATTCCACTTTAACTTTTTGCATAACCAAAACGGTGTCGGATCACACGGTCCACACGCTACTATATCCACTGCTAATACCATTTTAGGCTCTATATGTGCCATGGCTAGTACCATCTCTTATGCATTGTGGCTTATTATTCATGCTAAATTTAGTGAAATGTACCCAACTCATTACTCAAGCACAACATTGATGTCTTTTTGGGCATCACTAATTTCCATTGTGTTTGCTCTCTGCTTTGAGAGGGATTTATCGGGGCTTCAGCATCTGTGTGGCTGGTCGCCGGGCTGTTACAATTTAAGTGAATGGAGGTTGGGTTGGAATATTAGGTTAATAACTGTTGTTTATGCGGGTATAGTGGTTTCAGGAGTAATGATAGCTGTAATTTCATGGGTAGTACATATGAGAGGTCCATTGTTTGCCTCTGTTTTTAACCCTCTCATGCTAGTCATTGTGGCCTTGGCTAGTTGTACCATGTTGAATGAGAAGCTATATCTTGGAACCATTTTTGGAGCAATGTTGATTGTATGTGGCTTGTATGTGGTTTTGTGGGGTAAAAGTGAAGAGATGAAGAAAAAGAACCAATTAGTACCATCAAAAAGCTCTAATAAATTTGGCACAGTTGAAATAGTTGTACAAGATAAAAACAACCATAATAATAGCAATGGTCAATCTCAAGGTTAA 1179 0.3876 MMEKLCSVMHGLKPTLLMIMVQITFAGVNLLYKLAVNDGMNLRIVVAYRFIFATAFIAPLAFFLERKKRAKMTWTILFQSFLCGLFGGALAQNFHLEAMSLTSVTFTSAMANLVPAVTFIMAVSLGMEKLNLRTKAGKAKIIGTVTGIGGAMVLTFVKGIEIKIGSFHFNFLHNQNGVGSHGPHATISTANTILGSICAMASTISYALWLIIHAKFSEMYPTHYSSTTLMSFWASLISIVFALCFERDLSGLQHLCGWSPGCYNLSEWRLGWNIRLITVVYAGIVVSGVMIAVISWVVHMRGPLFASVFNPLMLVIVALASCTMLNEKLYLGTIFGAMLIVCGLYVVLWGKSEEMKKKNQLVPSKSSNKFGTVEIVVQDKNNHNNSNGQSQG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00151 392 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020
Trre3g00151 392 Pfam EamA-like transporter family 194 348 IPR000620 GO:0016020
Trre3g00151 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 146 - -
Trre3g00151 392 PANTHER WAT1-RELATED PROTEIN 14 360 IPR030184 GO:0016020|GO:0022857
Trre3g00151 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 272 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00151 Trre-Chr3 1050865 1055362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00151 2 369 Nodulin-like Gene Family AT1G68170 40.489 6.30e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00151 - - tpra:123910665 645.58