Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00149 ATGAGGAAAGTAGTGCATGGATTGAAACCAGCCCTTATGATGTTGATGGTTCAGATTGCATTTGCTTCTGTAAATGTTCTCTACAAACTTGCTATAAATAATGGAATGAGCGTCAGAGTCCTTACAGCTTATCGTCTTATTTTCGCAGCAGCGACCACAATTCTACTTGCTCTAATTTTTGAAAGGAAGAACAGACCAAAGCTGACTTGGAGGGTGCTTTTTATGTCATTCTTTTGTGGTTTATTTGGGGGAAGCTTATTCCAAAACCTTTATTTTGAGTCATTGGCACTAATATCAGCAACATTTGCTTCCGCGGTTTATAATCTCATTCCTGCCGTCACTTTTATCTTGGCCGTATCTTTTGGTTTCGAAAAGTTGAATATCCAAACAGCAGCAGGCAAAGCTAAGGTGGTAGGAACAATAACAGGAATTGGAGGGGCAATGCTTCTAACATTTCTCAAAGGCGTTGAAATTAATATTTGGACCTTCCACATTAACCTCTTGCATAAGGGGAAAAATGGAACACTTAATGATGACTCTGGTAGTAAATTGTTGGGTATTTTTTTTGGTCTTGGAAGCTGCTTTTGTTTTGCATTATGGCTCATCATTCAGGCTAAGATGAGCAAAGAATACCAAGGCCATTATTCAAGTACAGCATTAATGTCCTTAATGGGGGCAATTCAAGCTACTATTTTTGCCCTTTGTGTTGAGAAAGATTGGAGCCAATGGAGGTTGGGTTGGAGTATTAGGCTTCTAACTTCAGCATATTCGGGAATTGTGGCCTCTGGTATAATGGTTATTGTCATTGCATGGTGTGTAGGGATGAGAGGCCCATTGTACGCCTCTGTTTTCAATCCCCTTATGCTTGTGCTTGTGGCCATTGCTGGTTCCTTGATGTTAGATGAGAATTTATACTTAGGAAGTGTAATTGGAGCAGTGCTGATAATGGTTGGATTATACATGGTATTATGGGGTAAGAGCAAAGAAATGAAAAAAGTCACTCATTTAGAAATCAACCAAATTGTGGTTATTGTCACACCCACCGATGTAGATCCTGAAAACATCAACAACAATCATACCAATAGTAAGAGCAACATTGTTGGCAAGGATCTTGAACATGATAATGATTCATCAAAATGTGAACATGAAAGACAACACAATAAGGAAAATAATGGGAAACAAGAATTGGTTTCAATCCTTGAAGTGGAGTCTTGA 1215 0.3877 MRKVVHGLKPALMMLMVQIAFASVNVLYKLAINNGMSVRVLTAYRLIFAAATTILLALIFERKNRPKLTWRVLFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILAVSFGFEKLNIQTAAGKAKVVGTITGIGGAMLLTFLKGVEINIWTFHINLLHKGKNGTLNDDSGSKLLGIFFGLGSCFCFALWLIIQAKMSKEYQGHYSSTALMSLMGAIQATIFALCVEKDWSQWRLGWSIRLLTSAYSGIVASGIMVIVIAWCVGMRGPLYASVFNPLMLVLVAIAGSLMLDENLYLGSVIGAVLIMVGLYMVLWGKSKEMKKVTHLEINQIVVIVTPTDVDPENINNNHTNSKSNIVGKDLEHDNDSSKCEHERQHNKENNGKQELVSILEVES 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00149 404 MobiDBLite consensus disorder prediction 366 391 - -
Trre3g00149 404 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Trre3g00149 404 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020
Trre3g00149 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 328 - -
Trre3g00149 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 139 - -
Trre3g00149 404 PANTHER WAT1-RELATED PROTEIN 9 335 IPR030184 GO:0016020|GO:0022857
Trre3g00149 404 MobiDBLite consensus disorder prediction 353 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00149 Trre-Chr3 1016745 1019768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00149 8 340 Nodulin-like Gene Family AT1G25270 42.730 6.68e-98 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00149 - - gmx:100809587 493.812