Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00133 ATGATGGTTTCCATGCCCAAAATTGTGTTCTTTGTTCCAATGTTACTAACCATTCTTGTTTCTTTGCAGTTCACAGATGGTAAATTCTTTCCTCCGATCATTCCTCCCCACCTTCATCTATACATTACCAACAACATAAGCAATACTCCACTCGGTGTTCACTGCAAAGACAAACATCATGATGCTGGATTTCGAACAATAAATTTTGGCGGAATTTATGAGTTCGAGTTTACCCCAACACCCATTTTTAGAGAAACCTTATGGTTTTGTCGATTTTCATGGAACGATGTATTTCAATACTTCGATATTTATGTACAAAAACGTGATGTTGATTATTGCGATAAAGAATGTCATTGGGCAATAAACAAATCTGGTCCATGTAGGCTTCACTTTCACATACCCATTTTTATCCACACTGCCTCTTTATTCATTCCATTCCAATCTTTGCCGCAAAACCCTTTTCTTCGTAACTCATCAATATCCACTCTCATTTCTACACTAAGCATCAGTGATTCAACAGAAGCTTTGAAGTTAGTTATTTCGGAATGTAAACCGAAGGCTAATATTGTGGACATTTGTGAGAAAGGAGATTCATTTATCAGAGAGCAAACCAGTAATGTGTACAAGAATGCGAAGAAGAAGAAGATAGAGAGAGTTGTTGCTTTCCCGACTTGCATATCTGTTAACAGCACAATTTGCCATTTTTCGCCTCTAGCAAGTGATGAAACAGTGTTGGAAGAAGGCAACATAGTGAAAATATGGATTCATTGCTGCAGTGGCTCACACCAATGTTCTTCAGGAAGGTCCAGTTACTGGACGGGCAGCTGA 828 0.3853 MMVSMPKIVFFVPMLLTILVSLQFTDGKFFPPIIPPHLHLYITNNISNTPLGVHCKDKHHDAGFRTINFGGIYEFEFTPTPIFRETLWFCRFSWNDVFQYFDIYVQKRDVDYCDKECHWAINKSGPCRLHFHIPIFIHTASLFIPFQSLPQNPFLRNSSISTLISTLSISDSTEALKLVISECKPKANIVDICEKGDSFIREQTSNVYKNAKKKKIERVVAFPTCISVNSTICHFSPLASDETVLEEGNIVKIWIHCCSGSHQCSSGRSSYWTGS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00133 275 Gene3D Creatinase/methionine aminopeptidase superfamily 172 258 IPR036005 -
Trre3g00133 275 Pfam Plant self-incompatibility protein S1 39 130 IPR010264 -
Trre3g00133 275 Pfam Metallopeptidase family M24 173 265 IPR000994 -
Trre3g00133 275 SUPERFAMILY Creatinase/aminopeptidase 173 268 IPR036005 -
Trre3g00133 275 PANTHER PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P 173 255 IPR047113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00133 Trre-Chr3 902630 906508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00133 36 136 Carbohydrate Esterase AT3G16970 38.095 6.33e-19 79.3