Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00129 ATGATGGTTTCCATGCCCAAAATTGTGTTCTTTGTTCCAATGTTACTAACCATTCTTGTTTCTTTGCAGTTCACAGATGGTAAATTCTTTCCTCCGATCATTCCTCCCCACCTTCATCTATACATTACCAACAACATAAGCAATACTCCACTCGGTGTTCACTGCAAAGACAAACATCATGATGCTGGATTTCGAACAATAAATTTTGGCGGAATTTATGAGTTCGAGTTTACCCCAACACCCATTTTTAGAGAAACCTTATGGTTTTGTCGATTTTCATGGAACGATGTATTTCAATACTTCGATATTTATGTACAAAAACGTGATGTTGATTATTGCGATAAAGAATGTCATTGGGCAATAAACAAATCTGGTCCATGTAGGGTTAGGCAAACATATTCAGAATGTTATCCTTGGAATCCAAAAGTTGTTATGTAA 438 0.3607 MMVSMPKIVFFVPMLLTILVSLQFTDGKFFPPIIPPHLHLYITNNISNTPLGVHCKDKHHDAGFRTINFGGIYEFEFTPTPIFRETLWFCRFSWNDVFQYFDIYVQKRDVDYCDKECHWAINKSGPCRVRQTYSECYPWNPKVVM 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00129 145 Pfam Plant self-incompatibility protein S1 39 139 IPR010264 -
Trre3g00129 145 PANTHER - 37 130 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00129 Trre-Chr3 885970 886407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00129 36 144 Carbohydrate Esterase AT3G16970 36.207 2.33e-21 82.0