Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00127 ATGGTTTCAACCTCCAATACTGTGCTATCAGTTTCTATATTATTAACAATTCTCGTTGTTTTGCTGTTCAATGGCGGTGAAAGTAAGACTTTTCCTGGCCCAGTAACAGTATATGTTACCAACAACATAACCGGTAATTATCAGCTTGGTGTTGATTGTAAAGACAAGCATACAGATTTTGGATATCGAATCATACATTTTAAAGAAAGTTACACCTTCACTGTTCATCCTACATTCCTTATACCAAATAAATTATACTTTTGTAGTTTTTCATGGATTAATGGAGCTAAATATTTTGACATTTATGTTCAAAAACGAGATGAGGATGATTGTGACAAAGAATGTCATTGGCAAATAAATGACTATGGACCATGCAAGGTGAAGACCGGATCTATACAATGTTTTAAGTGGAATCCTAATGTTGTTTAA 429 0.3333 MVSTSNTVLSVSILLTILVVLLFNGGESKTFPGPVTVYVTNNITGNYQLGVDCKDKHTDFGYRIIHFKESYTFTVHPTFLIPNKLYFCSFSWINGAKYFDIYVQKRDEDDCDKECHWQINDYGPCKVKTGSIQCFKWNPNVV 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00127 142 PANTHER - 33 128 IPR010264 -
Trre3g00127 142 Pfam Plant self-incompatibility protein S1 36 137 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00127 Trre-Chr3 873617 874045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00127 35 138 Carbohydrate Esterase AT3G16970 32.727 3.27e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00127 - - cam:101489286 162.155