Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00107 ATGGGGAAAATTGGAGATGAATATGTGCAACAAGAAGAACAGAGGGAGAACGACGGTGAACGTTCACGGTGTTCGGTGGTTTTGAGATTATTCAGTTTTAAGTGTCTATTCATTCTCTTTTTCAGTTTATCGGCTTTTCTTTCTGGAATCTTCTGGATTCTTCCTAAACACAAAACCGTAATTAGTTTTGATGCTAAAGATGTAATTAAGAATAGTGCTACTGTTCAGGCATCCTTCAGGCTGGAAAAACCAGTCTCACAGCTTATTCCATACATTGAAAGATTAGAATATGATTTATTTGGTGAAATAGCTCTGCCAAATACAAAGGTGGCTATCCTATCCATCCACCAAAGTGTTGCACCTAATTGGTCTGATGTGGTATTTGGCGTTCTCTCTGATCCAATGAATGTTCCAATAAATCCAGTGTACTTGAGTGTCATGCAGTTATCACTAATTGAACTGTTTCTCCAGCAATCCAACCTGACTTTCACAACATCTGTAATTGGGAATGCATCTTTGTTTGAGATCTTGAAGTTTCCCAGTGGGTTAACTGTAATACCAGCGCAGTCCGCTTCCATTTGGCAGATACGCGAGATTCTATTTAATTTTACTCTTCATAATTCGATATCTGAAGTTCTGGATAAGTTTGATGACTTTGAGGAAGAATTGAGGTTTGGATTGCAACTGAAGTCTGATGAGAATGTGTATGTGGAAATAACAAATGCACACGGCTCAACGGTAACTAGTCCTGTAGTAGTGCAGGCTTCAGTCATGCGAGGGTTTGAGAGCCTTTTGCCACAAAGATTGAAACAAATAGCTCAAACCATAAGAGGCTCTGCTAGAAAAAATCTCGGCCTTAATAACGGAGTTTTTGGCAAAGTCAAAGAAATCAGGCTGTCTTCTTTTCTAAAGGATACACTACATGCTTACCCACCTGCTCCTGCTCCTGCTCCATCCCCACAGTTAACTGATCACTCTGAGCCATTTATTTCACCATATCATTCTCCCTCTTATTCTCCAATATCCCCAGTAACTGTTAAGACACCTTGTTTTGACTGTGAAGTATCCTCACCTTCACCATCCATTGTGACCGAGCATTCTCCTGTTGCTTCCCCTACATCATATACTGCTAGCCACACAGCTGGGGTTGCTCCTGAGCTGTCACGCCGTGTAGCCGAGGTTTCTCATGGATTCAAGCTTCGCCAAGATGATGAGAGATCCAATGAGTTGGTGTCTCATTTGCTTGCTCCATCCTCTCCATCTTCAGCAGGTGGCGGTGTTTTGCATAGAGGAAACTTGCTAATGGGATTCTGTATGCTATTAGTGTCTTTTGTTTTTCTCAATGACATTACATTTCAATGA 1362 0.4126 MGKIGDEYVQQEEQRENDGERSRCSVVLRLFSFKCLFILFFSLSAFLSGIFWILPKHKTVISFDAKDVIKNSATVQASFRLEKPVSQLIPYIERLEYDLFGEIALPNTKVAILSIHQSVAPNWSDVVFGVLSDPMNVPINPVYLSVMQLSLIELFLQQSNLTFTTSVIGNASLFEILKFPSGLTVIPAQSASIWQIREILFNFTLHNSISEVLDKFDDFEEELRFGLQLKSDENVYVEITNAHGSTVTSPVVVQASVMRGFESLLPQRLKQIAQTIRGSARKNLGLNNGVFGKVKEIRLSSFLKDTLHAYPPAPAPAPSPQLTDHSEPFISPYHSPSYSPISPVTVKTPCFDCEVSSPSPSIVTEHSPVASPTSYTASHTAGVAPELSRRVAEVSHGFKLRQDDERSNELVSHLLAPSSPSSAGGGVLHRGNLLMGFCMLLVSFVFLNDITFQ 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00107 453 PANTHER F20B24.21 1 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00107 Trre-Chr3 770611 775192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00107 1 305 C3H Transcription Factor Family AT3G10810 39.617 4.63e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00107 - - gmx:100804252 549.666