Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06231 ATGGACAAGTTGTGGAGCTTCTCGTCAAGAACAAATAATGTTGTGGACACCGAAAGGCAACAATGGGAAGAAGAGAGGGATAATCTTCATGAACAATTAGATGATTTGGTCCCTCTCTCACAGGTTTTGGAGGATGTGGATTGTTTTCTCGATAACGCAACAACTGATCATAGTTATAGGGAAGAAGTTCCAAATTGTGTCGCTGTGTTGCACAAATTGTTAGAATCTACGATGGATAAATATAATAAACGGTGTAACGGAAGAAGAAGCAAATTTGGAAAAGATCCAAAGGATGACAACTCATTTCTATATATGGTGGATCGCATCTTTAAGCTCTCTACCACCTTGAACTTGAGTGATTTCTATTTAGACCAAACAAGCTCTATCCTAGAAAGAGTTATGTTTATTTTAGAGAATAACCTTTGTGCTCTTTTACAAGACCCCGTATCCAAAAATTGCAGACCAACACCACCACCCAAGAAATCGTCCTCCTTTGGTTCCCTTCAGCTTCAGTTTCAACTTCAAGATGAGAGGGAATTATCTCTAAAGCCCAACAACCCAAATGATGATCAGGGTGAGGAGGATGACGACGACTTATTGCCAACTTTCTCTACGGAAGACCTTTCCGTTCTAAACAAGATTGTGACTGTCATGATCAATGTGGGCTATCATACAGAGTGTTGCATGGCTTTTACCAATTTTAGACGAATTGCTTTCAAAAATGTGTTGCAAAAATTGGGATACACATGCATAAGGATGGACGAGGTTTATAAAATGCAATGGGGGTTGTTGGAAGGAGAAATTGCGACATGGAACAGAGTGTTTCGGCATTGCACTAGTGTTCTCTTCAACGCTGAAAGAAAGCTATATAATTCAATATTTTCAAATCAGCCACATATTTCTAGAGTCGTATTTAGTGATATTGCCCAAGCTGTCATCGTCAACTTTCTAAACTTTGCACAAGCAGTTGTTTTAACCAAGCCATCACCAGAAAAACTTTTCAAATTCCTTGATATGTATGAGACCTTAAGGGATGAAGTGGAGTCTGTCGTCGTACTCATTGATGATGACGGTTCAGAGCAGTGTGCCAAATATTTGGGGTACGAACTGGCTGCAGCAAAGCATGGGATCGTAGAGGCTGTTGTGGCAATGTTTTATGATTTGGAAAACTCCATTAAGGGTGACAATGAAAGGATTCCAATCCCCTACGGTGCGGTTCATCCATTGACTCGTTATGTAATGAATTATCTTAAATATGCATGTGAATACAAAGTGACATTAGAGCAAGTGTTTTGTCAATATTTTACGAATCATTATCTTACTACTATTGATCGTCATTCTGTTAATAATAATAAGGGTACATCCACTACCACCACAAAGATTCAAAATGAAGAAAATAATACATCAGAAGATCAAGAATTGGATGAAACGCCAAAGAAATCACCTTTTGTGGTTCAATTGATGACAATTATGGACCTTTTAGATGTAAATACTGAAAGAAAATCCATGCTATATAGGGATATGGCTTTACGTTGTATTTTTCTAATGAACAATGGAAGATACATAGTACAAAAGATTAAAGGGTGTGTTGATCTTCACGAGTCCATGGGCGACAATTGGTGTAGAAGGATGCAATCAAGTTTGAGGTTGCACCATAAGAGTTATCAGAGAGAGACTTGGACCAAGGTGGTACAATGCCTCAACCCCGATGGTTTGCAACAGCAGGGGAACAAAGTGTCCAAGCAAATTTTGAGAGAGAGGTTTAAGTGCTTTAATTCCATGTTTGAAGAGATCCACAAGACACAAAGCAGTTGGATCGTAAGCGATGAACAACTTCAATCAGAGCTAAGAGTTTCAATATGCTCTTTGGTCATACCTGCGTACCGCTCCTTTATGGGAAGATTCAAGCATTATCTAGAATCAGGCAAACATATCGACAAGTATATCAAGTATCATCCTGACGACCTTGAGACTTTGATTGACGATTTTTTTGTTGGAAATGCTACATCTATGCCTCGAAGGAGAACATGA 2031 0.3885 MDKLWSFSSRTNNVVDTERQQWEEERDNLHEQLDDLVPLSQVLEDVDCFLDNATTDHSYREEVPNCVAVLHKLLESTMDKYNKRCNGRRSKFGKDPKDDNSFLYMVDRIFKLSTTLNLSDFYLDQTSSILERVMFILENNLCALLQDPVSKNCRPTPPPKKSSSFGSLQLQFQLQDERELSLKPNNPNDDQGEEDDDDLLPTFSTEDLSVLNKIVTVMINVGYHTECCMAFTNFRRIAFKNVLQKLGYTCIRMDEVYKMQWGLLEGEIATWNRVFRHCTSVLFNAERKLYNSIFSNQPHISRVVFSDIAQAVIVNFLNFAQAVVLTKPSPEKLFKFLDMYETLRDEVESVVVLIDDDGSEQCAKYLGYELAAAKHGIVEAVVAMFYDLENSIKGDNERIPIPYGAVHPLTRYVMNYLKYACEYKVTLEQVFCQYFTNHYLTTIDRHSVNNNKGTSTTTTKIQNEENNTSEDQELDETPKKSPFVVQLMTIMDLLDVNTERKSMLYRDMALRCIFLMNNGRYIVQKIKGCVDLHESMGDNWCRRMQSSLRLHHKSYQRETWTKVVQCLNPDGLQQQGNKVSKQILRERFKCFNSMFEEIHKTQSSWIVSDEQLQSELRVSICSLVIPAYRSFMGRFKHYLESGKHIDKYIKYHPDDLETLIDDFFVGNATSMPRRRT 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06231 676 Gene3D Exocyst complex component Exo70 89 674 - -
Trre2g06231 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 62 665 IPR004140 GO:0000145|GO:0006887
Trre2g06231 676 SUPERFAMILY Cullin repeat-like 93 664 IPR016159 -
Trre2g06231 676 Pfam Exo70 exocyst complex subunit 270 662 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre2g06231 676 MobiDBLite consensus disorder prediction 446 478 - -
Trre2g06231 676 MobiDBLite consensus disorder prediction 179 198 - -
Trre2g06231 676 Coils Coil 12 32 - -
Trre2g06231 676 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06231 Trre-Chr2 66740264 66742294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06231 39 675 EXO70 exocyst subunit family AT5G13150 44.136 7.01e-175 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06231 K07195 - mtr:25485763 1051.97