Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06229 ATGGGTTGTTTTTCGTGTTTCGATTCGAAGGAGGATGAGAAGCTGAATCCAAATCCTCAGCAGCAACAGCAGCAGCAGCAAGAAACCCATCATCACGATCATAATCTCCCCTCTCATGTTTCCAGATTGCCCTCTGCAGCCTCTGGAGCAGAGAAACTGCGGTCAACAAGTAATGGAGGAGCATCCAAAAGGGAATTGACTGCTGCTCTTAAAGACGGGCCGCCTGGCCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCTGCTGCAACAAAAAATTTCAGGCCTCAGTCCTTTTTAGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGACGCCTGGAAACTACGGGTCAGGCTGTTGCTGTTAAGCAGTTAGACAGAAACGGTCTCCAGGGTAATCGGGAGTTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAACCTTGTCAGTCTCATTGGATACTGTGCGGATGGGGACCAACGCCTCCTGGTTTATGAATTTATGCCGTTGGGATCATTGGAAGACCACCTTCACGATCTCCCCCCTGATAAGGAGCCATTAGATTGGAACACTAGAATGAAAATAGCTGCTGGTGCTGCAAAAGGATTGGAATACCTCCATGACAAGGCCAATCCTCCAGTAATTTATAGGGACTTCAAGTCATCTAATATATTACTTGATGAAGGTTATCACCCAAAGCTTTCTGACTTTGGTCTGGCGAAGCTTGGTCCTGTTGGGGACAAATCACATGTTTCCACTCGTGTCATGGGAACTTATGGTTACTGCGCTCCTGAGTATGCTATGACTGGACAACTGACTGTAAAATCTGATGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACCCGGCCCCATGGAGAACAAAACCTTGTTACATGGGCACGGCCGTTGTTCAATGACCGTAGGAAGTTTCCAAAGTTGGCAGATCCACGATTGCAGGGTCGGTATCCCATGCGGGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCAGCTGCACGTCCTCTGATTGGGGATGTGGTAACGGCCCTCTCTTATCTAGCCAACCAGGCACATGACACTAACAATGCCGGCATTGGTAATAATAAGGGAGCTAGAGATGATAAAGGTGGAAGAATATTACAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCAAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAAAAAAGACGGCAGAGTGTGCAGGGCAGTTTTGATGCTTCTAATGCCTAG 1401 0.4782 MGCFSCFDSKEDEKLNPNPQQQQQQQQETHHHDHNLPSHVSRLPSAASGAEKLRSTSNGGASKRELTAALKDGPPGQIAAQTFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLETTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAHDTNNAGIGNNKGARDDKGGRILQNDEGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSVQGSFDASNA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06229 466 PANTHER OS07G0668900 PROTEIN 3 381 - -
Trre2g06229 466 Gene3D Phosphorylase Kinase; domain 1 79 171 - -
Trre2g06229 466 MobiDBLite consensus disorder prediction 447 466 - -
Trre2g06229 466 FunFam Serine/threonine-protein kinase PBS1 68 171 - -
Trre2g06229 466 CDD STKc_IRAK 101 369 - -
Trre2g06229 466 Gene3D Transferase(Phosphotransferase) domain 1 172 393 - -
Trre2g06229 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Trre2g06229 466 MobiDBLite consensus disorder prediction 407 432 - -
Trre2g06229 466 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Trre2g06229 466 FunFam Serine/threonine-protein kinase PBS1 172 387 - -
Trre2g06229 466 MobiDBLite consensus disorder prediction 1 62 - -
Trre2g06229 466 ProSiteProfiles Protein kinase domain profile. 95 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g06229 466 SUPERFAMILY Protein kinase-like (PK-like) 78 369 IPR011009 -
Trre2g06229 466 MobiDBLite consensus disorder prediction 378 432 - -
Trre2g06229 466 Pfam Protein kinase domain 98 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06229 Trre-Chr2 66731462 66736522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06229 1 454 Glycoside Hydrolase AT3G07070 55.507 5.65e-171 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Trre2g06229 Pkinase 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06229 K13430 - gmx:100777987 792.727