Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06208 ATGTCTCGCAAAGGCAACAACAACAACGACGAAATGGAAGAAGAAGCGTTTCGACGCGTCAAGAGAGAACGCCTCAACGCCAATGATAACGCACCGGAGGACCACCAAGATTCTTCCAGCCGCAGAATCATCCGTTCCGAGTTTCTCAAACTCAAGTCTCTCATCAACGAGAAAAAGGATGATTTGATGAACACAGATTCTGATAAGTTCGATTCAATCCTTCACGAGTTCGACAAATTGCATAACCAAGTGAAGAGACCTCGAGAGCAGGTTGCTGACGCTGAAGCACTTCTCGATCTAACACGCACTTTGCTTGGATCCGTTAAATCTCTTGCCAACGAAGGTGTTACTCCTTCTCAGTTTGTTTCTTCTCTTCTCAAACACTATGCTCACCCACCTAACACTTCAATTCACTGGCAAAAACTCGGCATTGCTGTTTCCCCCATTTTCCTCACGGTTCATGGCTCTTCTACCATGCTTGGTCCCATGGAAAATCAGTTGAAACAGCGCAAAGCTATTGTCTCTAGAAAGCGAGCTCCTCCTGCAACTACAACTGCTAGGCCTGAACAGCTGGATGATGCTGTTGGAGGGGAAAAAACGGATACTGACAAAAACATGTCAACCATGTTTAACATATTAAGGGAAAAGAAAACGGTCCAGCTTGAACACCTCATTTTGAACAGAATTTCATTTGCTCAAACAGTGGAAAACTTGTTTGCCCTCTCATTTTTAGTGAAAGATGGCCGTGCTGAGATCATTATGGATAAAAACCGTTTGCACTATGTTTCACCAAAAAATGCTCCTGCTGCCAACTCTGTAATGTCAAAAGAAGTTTCTTACACTCATTTTGTCTTCAGATTTGATTTCAATGACTGGAAGATAATGAAGGATATTGTGGCTGAGGGCGAAGAGCTGATGCCAAATAGGATTCAACACGGCAATCGGGTAGACTCACACCAAGAAATTAGCGGTGACAATTCCCAACAAGCCCTGGCTGTGACCCCGATTAGAAAGATATCCAGAAATCGGGGACGGCTTCTTCAAGAAGAAGTGGTTGTTGAAGAATCGCCCGAGTGCAATGATGAAAATGCTTCTAGAGCTGCTGCAATCCGAAGGTGTAAGCGTAAACTTCCTTAA 1137 0.4406 MSRKGNNNNDEMEEEAFRRVKRERLNANDNAPEDHQDSSSRRIIRSEFLKLKSLINEKKDDLMNTDSDKFDSILHEFDKLHNQVKRPREQVADAEALLDLTRTLLGSVKSLANEGVTPSQFVSSLLKHYAHPPNTSIHWQKLGIAVSPIFLTVHGSSTMLGPMENQLKQRKAIVSRKRAPPATTTARPEQLDDAVGGEKTDTDKNMSTMFNILREKKTVQLEHLILNRISFAQTVENLFALSFLVKDGRAEIIMDKNRLHYVSPKNAPAANSVMSKEVSYTHFVFRFDFNDWKIMKDIVAEGEELMPNRIQHGNRVDSHQEISGDNSQQALAVTPIRKISRNRGRLLQEEVVVEESPECNDENASRAAAIRRCKRKLP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06208 378 PANTHER UNCHARACTERIZED 5 362 IPR027786 GO:0005634|GO:0006281|GO:0030915
Trre2g06208 378 MobiDBLite consensus disorder prediction 175 200 - -
Trre2g06208 378 Pfam Nse4 C-terminal 219 305 IPR014854 -
Trre2g06208 378 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06208 Trre-Chr2 66586771 66588717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06208 39 377 Non-SMC Element family AT1G51130 52.000 1.26e-119 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06208 K22825 - gmx:100792117 497.278