Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06207 ATGGAATATTACGGGGTTGTGAGTTTGGTATTAGCCGTTTCGGTATGGATTTGGTTGGCAATAGTGATGGAACATAAAAGATCAAAACTTGGTCATCAACTTCCACCTGGACCAAGATGTTGGCCAGTGGTTGGCAACATTTTCCAGATAGGTTTGTCACCTACACACGAGTCCTTTACAATACTTGCTCATAAACATGGTCCTATCATGACCCTTTGGCTAGGTTCCATGTGCACCGTCGTTGCGTCCTCGAGTGATGTAGCTTGTGACATGTTCAAAAACAACGATGTTGCTCTTGCTGGAAGGAAAATTTATGAAGCCATGAAAGGGAATCATGAGCATGGTAGTGAAGGTTCACTCATAACTTCTCAATACAACGCACACTGGCGCATGCTGAAGCGCTTGAGCACCACCGAGTTCTTTGTCACAAGTCGCTTAGATGCTATGCGAGGTGTGCGTGCAAAATGCATAGACCGTATGGTTCACTTGATAGATGAAGCTGCTTGTGACTCTGGGAATGGTGTTGTTGATGTTGGTAGGTTCTTTTTCTTGATGGCTTTTAATCTCATTGGGAACCTTATATTTTCAAAGGACTTGTTAGACCCTGAAATGGAGAGAGGGGCTAGATTCTATCATCATACGGTTAAGGTTATGGAATATGCTGGGAAACCCAACGTTGCAGATTTCTTTCCTATATTGAAGAGGTTTGACCCTCAAAGTATAAGGAGAAACACACAATTTCACGTTGAAAGAGCATTTGACATAGCAGGTTGGTTCATCAAACAAAGGATGGAAAATGATATTGTTGGCGGAGGAAATGGAAACAACAAAGACTTTTTGGATGTACTCTTGCAATTTCATGGCGACAGTGTCAGCGGACCCTATAATTTTACTTCAAGGACTATTAACGTTGTTGTCTTTGAAATGTTCACTGCAGGGACAGACACAACAACAAGCACACTAGAATGGGCGATGGCGGAACTTCTACACAACCCAAGAACGCTAAAGAAATTACAAATGGAACTAAGGAGTAAAATAGGTGCGGATAGGAAATTTGAAGAAAATGACTTAGAAAATCTACCCTACCTCAAAGCAGTTATCAAGGAGACGTTGAGACTTCACCCGCCTCTTCCTTTTTTGGTTCCTCACATGGCCATGGACTCTTGCAAGATTGGAGACTACTACATTCCCAAAGAAACACAAATTTTAGTGAATGTTTGGGCAATTGGGAGGGACCCAAAAGTGTGGGATGCTCCTTCATTGTTCTGGCCAGAAAGGTTTATGGAGCCAAACATGATAGATTACAAGGGACACCATTTTGAGTTTATACCTTTTGGTTCAGGCCGAAGAATGTGCCCAGCAATGCCTCTTGCCTCACGTGTGCTTCCACTGGCACTAGGCTCCCTCCTCAGCTACTTTGATTGGATTTTGCCCGATGGCCTGAAGCCAGAGGATATGGACATGACAGAGGGAATGGGAATAACATTGAGAAAAGCTGTCCCTTTAAAAGCCATACCTGTGCCTTACAAAGGAACTCCAGTTGATGTTGCAGGGAAACAATAA 1563 0.4312 MEYYGVVSLVLAVSVWIWLAIVMEHKRSKLGHQLPPGPRCWPVVGNIFQIGLSPTHESFTILAHKHGPIMTLWLGSMCTVVASSSDVACDMFKNNDVALAGRKIYEAMKGNHEHGSEGSLITSQYNAHWRMLKRLSTTEFFVTSRLDAMRGVRAKCIDRMVHLIDEAACDSGNGVVDVGRFFFLMAFNLIGNLIFSKDLLDPEMERGARFYHHTVKVMEYAGKPNVADFFPILKRFDPQSIRRNTQFHVERAFDIAGWFIKQRMENDIVGGGNGNNKDFLDVLLQFHGDSVSGPYNFTSRTINVVVFEMFTAGTDTTTSTLEWAMAELLHNPRTLKKLQMELRSKIGADRKFEENDLENLPYLKAVIKETLRLHPPLPFLVPHMAMDSCKIGDYYIPKETQILVNVWAIGRDPKVWDAPSLFWPERFMEPNMIDYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLSYFDWILPDGLKPEDMDMTEGMGITLRKAVPLKAIPVPYKGTPVDVAGKQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06207 520 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 508 - -
Trre2g06207 520 FunFam Cytochrome P450 76C4 26 505 - -
Trre2g06207 520 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Trre2g06207 520 Pfam Cytochrome P450 35 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 Gene3D Cytochrome P450 27 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g06207 520 CDD CYP76-like 63 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06207 Trre-Chr2 66583933 66585797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06207 6 512 Cytochrome P450 AT3G52970 61.333 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06207 - - tpra:123898388 1010.75