Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g06193 | ATGGACCACCGCAGAGACCTTCACCATCGTCCTGCTCATTTGGCACATGCTGCTACTCCTGATTACTTTGTCTCTACTTACAAAGACGATTTATATTTGAGGAAGAGAACAAGGATGCGTCGTTGGCTATGCTGCACTTGTCAGGTGGAGGAGTCTTATCCATCAAATGAAAACGAACACCTGAAAAGCCCAAGGAGTTTTGGAGAAGGCAACCAAAAAGGCTCAAGGGGGTCAGCTCCTGTCAAACCTGAAACACAAAAGGCACCACCTCCTATCGAAGTTCCAGCATTATCCTTAGATGAGCTGAAGGAAAAAACTGACAACTTTGGGTCAAAGGCATTGATTGGCGAAGGGTCGTATGGGAGAGTGTATTATGCAACATTAAACAATGGGAAAGCTGTGGCTGTGAAAAAGCTTGATGTTTCTTCTGAACCCGAATCAAATAACGAGTTTCTTACCCAGGTTTCCATGGTCTCAAGATTGAAGAATGAAAATTTTGTTGAGTTGCATGGATACTGCGTTGAAGGAAATCTTCGCGTACTTGCATATGAGTTTGCGACTATGGGCTCTCTTCATGACATTTTGCACGGAAGAAAGGGAGTTCAAGGGGCACAACCAGGGCCAACTCTTAACTGGATGCAGCGAGTTAGAATTGCAGTTGATGCAGCAAGGGGATTAGAGTATTTACATGAGAAAGTTCAACCATCAATTATACACAGGGATATCAGGTCAAGCAATGTGCTTATCTTTGAAGATTACAGAGCTAAGATAGCTGATTTTAACCTCTCTAATCAGGCCCCTGACATGGCTGCACGTCTTCATTCTACCCGTGTACTGGGAACTTTTGGGTATCATGCTCCAGAATATGCCATGACTGGGCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGCGTTGTTCTTCTTGAACTTCTTACAGGTAGGAAACCCGTTGATCATACCATGCCTCGAGGACAGCAAAGTCTTGTCACATGGGCTACCCCAAGATTAAGTGAAGATAAAGTGAAACAATGTGTGGACCCAAAACTGAAAGGAGAATATCCCCCAAAAGGAGTTGCTAAGCTTGCAGCTGTAGCAGCCCTGTGTGTGCAGTATGAAGCTGAGTTTAGGCCTAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTCAAGGCTCCCGCACCTGCACCAGAAACTTGA | 1203 | 0.4439 | MDHRRDLHHRPAHLAHAATPDYFVSTYKDDLYLRKRTRMRRWLCCTCQVEESYPSNENEHLKSPRSFGEGNQKGSRGSAPVKPETQKAPPPIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNNEFLTQVSMVSRLKNENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLNWMQRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLIFEDYRAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPAPAPET | 400 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g06193 | 400 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 237 | 249 | IPR008266 | GO:0004672|GO:0006468 | |
Trre2g06193 | 400 | SMART | tyrkin_6 | 109 | 387 | IPR020635 | GO:0004713|GO:0006468 | |
Trre2g06193 | 400 | FunFam | PTI1-like tyrosine-protein kinase 3 | 71 | 185 | - | - | |
Trre2g06193 | 400 | ProSitePatterns | Protein kinases ATP-binding region signature. | 115 | 138 | IPR017441 | GO:0005524 | |
Trre2g06193 | 400 | FunFam | PTI1-like tyrosine-protein kinase 3 | 187 | 397 | - | - | |
Trre2g06193 | 400 | ProSiteProfiles | Protein kinase domain profile. | 109 | 391 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g06193 | 400 | MobiDBLite | consensus disorder prediction | 54 | 93 | - | - | |
Trre2g06193 | 400 | SUPERFAMILY | Protein kinase-like (PK-like) | 89 | 387 | IPR011009 | - | |
Trre2g06193 | 400 | Pfam | Protein tyrosine and serine/threonine kinase | 114 | 387 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g06193 | 400 | PANTHER | PTO-INTERACTING PROTEIN 1-LIKE | 42 | 395 | - | - | |
Trre2g06193 | 400 | Gene3D | Transferase(Phosphotransferase) domain 1 | 187 | 395 | - | - | |
Trre2g06193 | 400 | Gene3D | Phosphorylase Kinase; domain 1 | 78 | 185 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g06193 | Trre-Chr2 | 66510380 | 66513802 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g06193 | 43 | 388 | Receptor kinase-like Gene Family | AT4G02010 | 46.132 | 4.13e-93 | 293 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIII | Trre2g06193 | PK_Tyr_Ser-Thr | 8.6e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g06193 | K13436 | - | mof:131150424 | 667.151 |