Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06190 ATGCAAAAAGTTTCTTTGCACATGGATTTATATGATAGGTTGGAGCGCAAGACTGTGAAGAGGAAAAGGGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTGCTTGAGCAATTGGCTGAAGAAATTCCTGTTGAGCTTAAACGGGTCATGGAATCAGATTCTGCATCAACAGAGGATCTGATTGCTTACAACATCATTCCTATAGATGCTGCTTCTTCAACAAATGCTATTGTTTTTTTCCCTGAGGTGCAAGCGGCAATTTCATCTTTGAATTATTTCAATGGCTTGCCTGAACTGCCCAGGGCCTATTTCATTTCTCCGACAAGGAATGCCAACATGTTAGATTTTCTGCAGTATACTTTTGGATTTCAGAAAGATAATGTAGCTAATCAGCGTGAACACATAGTTCATCTGCTTGCAAATGAGCAATCTCGGCTTGGAGTTCCAGACAAAACCGAACCCAAATTGGATGAAGCAGCCTTGCAAAAAGTATTCCTCAAGTCCCTCGAGAATTACATAAATTGGTGCAACTACCTATGCATTACGCCTGTTTGGAGCAGTTTGGAGGCTGTGAGTAAAGAGAAGAAGTTGCTGTATGTTTCTTTATACCTACTAATATGGGGTGAAGCTTCAAATGTCAGGTTTCTACCAGAATGCCTGTGCTACATATTCCATCATATGGCTAGAGAAATGGATGAGATCTTAAGGCAGCAGATTGCACAGACAGCTAATAGTTGCACTTCTGAGAATGGTGTCTCATTTCTTGATCATGTTATCCTTCCTCTCTATGACGTTATTTCTGCAGAAGCTACAAACAATGATAATGGGAAGGCACCTCATTCATCCTGGAGAAATTACGATGATTTTAATGAGTATTTCTGGTCACTACATTGCTTTGAGCTTAGCTGGCCATGGCGCAAAAGTTCTTCATTTTTCCAAAAGCCCCATCCCAGATCAAAGAAAATGTTAGCTGGCAGAAGTCAACGTCAGGGGAAAACATCTTTTGTGGAGCATCGGACTTTTTTTCATCTTTATCATAGTTTCCACCGATTGTGGATATTTCTTTTCATGATGTTCCAGGGTCTAGCAATTATTGCATTCAATGATGGAAAATTTAATTCCAAGACCTTGCGAGAGGTTCTTAGTCTTGGACCTACATTTGTTGTGATGAAACTTTTTGAGAGTGTCCTGGACATTTTTATGATGTACGGTGCATATACAACAACCAGGCGCTCAGCTCTATCACGGATTTTTCTAAGATTTCTTTGGTTTAGCCTTGCTTCAGTTTTTGTCACTTTCCTTTATGTAAAAGCACTCCAGGAAGAGAGTAAAAGAGATTCAAATTCAGTTATTTTTAGATTTTATGTGATTGTTGTCGGGATTTATGCCGGTGTCCAATTTTTCATTAGTTTCCTCATGCGGATTCCTGCATGTCATCTTCTGACCAACCAATGTGATCGTTGGCCTCTCATTCGCTTTGTGAAGTGGCTCCGCCAGGAACGGCATTATGTTGGACGGGGAATGTACGAAAGGAGTTTGGATTTCATAAAGTATATGCTGTTTTGGCTTGTCATTTTGAGTGCAAAATTTTCATTTGCTTACTTTCTTCAGATCAAGCCACTTGTGAAACCAACAAGGGACATAATAAAAGAGAAAAATTTAGTTTACTCTTGGCATGATTTTGTCTCTAAAAATAATCACAATGCTCTGACAATTGTTAGCATATGGTCTCCAGTGGTTTGTATTTATCTTTTGGACATATATGTGTTTTACACACTTGTATCCGCTGTCTGGGGATTCTTGCTCGGGGCAAGAGCTCGTCTGGGAGAGATAAGGTCACTCGAAGCGCTGCAAAAACTTTTTGAGCAGTTTCCTGGAGCTTTCATGGACACTCTTCATGTTGCTCTACCCAACAGGAGTGCCCAACTGTCATCTGTTCAGGTTGTTGAAAAGAACAAGGTTGATGCTGCTCGGTTTTCCCCGTTTTGGAATGAGATTATAAGAAATCTAAGGGAGGAAGACTATATAACCAACTTTGAACTGGAGTTGCTTTTAATGCCTAGAAATTCTGGAGATATTCCTCTGGTTCAGTGGCCACTCTTTCTACTTGCAAGCAAGATATTTTTAGCTAGGGACATTGCTGTTGAGAGTAAAGATACTCAAGATGAGCTTTGGGATAGGATTTCACGCGATGACTATATGATGTATGCAGTTCAGGAGTGTTACTATGCAATTAAACTCATTTTAACAGAAGTATTAGATGATGCAGGAAGGATGTGGGTTGAAAGGATATATGATGATATTAATGCTAGTATTACAAAAAGGAGTATTCATGTGGACTTTCGACTAAATAAGTTGGCTGTTGTGATATCTAGAATAACTGCATTGATGGGGATTCTGAAAGAGACTGAAACACCCGAGCTTGAAAAAGGTGCAGTTAGGGCTGTTCAGGATCTCTATGATGTTGTACGATATGATGTCCTTTCTATAAATATGAGGGATAATTATGACACATGGAGTTTACTGACCAAAGCTAGAGATGAAGGTCATTTGTTTCAAAAGTTGAAATGGCCAAATGCAGACTTAAGAATGCAAGTCAAAAGATTATATTCATTGCTGACTATCAAAGACTCTGCGTCAAGCGTACCTAGAAATCTTGAAGCTAGGCGAAGGCTGGAGTTTTTTGCAAATTCACTTTTTATGAAGATGCCTCGTGCAAAGCCAGTTCAACAAATGTTATCTTTTAGCGTTTTCACCCCATACTATTCTGAGATTGTGCTTTATAGCATGGCTGAACTCCAAAAGAAAAATGAAGATGGAATTTCCATTTTGTTCTACCTTCAGAAGATATTTCCAGATGAGTGGAAAAACTTTCTTGCCCGAATTGGCCGTGATGAAAATGCAAGTGACACTGATCTTTTTGATAGTCCTAGTGATATTCTTGAACTGCGTTTTTGGGCTTCTTATCGGGGGCAAACATTGGCCAGAACTGTTCGGGGGATGATGTATTATAGGAAGGCTCTTATGCTTCAGACCTATTTGGAGAGGACTACAGCTGGTGGAGATTTGGAGGCTGGACTTGGTTTTGATGAAGTATCTGATACACGTGGCTTTGATTTATCCCCTGAAGCACGTGCTCAGGCGGATCTGAAATTCACTTATGTTGTGACATGCCAAATTTATGGTAAGCAGAAAGAGGAGCAAAAGCCTGAGGCTGTTGATATTGCTTTACTTATGCAAAGAAATGAAGCTCTTCGTGTTGCTTTCATTGATGTTGTTGAAACTTTAAGAGATGGAAAAGTGAACACAGAATACTACTCAAAACTTGTGAAAGCTGATATTAATGGGAAAGACAAGGAAATATACTCAGTGAAATTACCTGGAAATCCCAAACTTGGTGAAGGGAAGCCCGAGAATCAAAATCATGCAATTATATTTACTCGTGGGAATGCAGTCCAAACAATTGACATGAATCAGGATAACTATTTTGAGGAGGCTTTGAAGATGAGGAATCTGCTTGAGGAATTTCATTCTGATCACGGTCTTCGTGCTCCTACCATACTTGGTGTTAGAGAACATGTCTTTACTGGAAGTGTGTCATCTTTGGCTTCATTCATGTCCAATCAAGAAACAAGTTTTGTGACTTTGGGTCAGCGGGTTTTAGCAAATCCTTTGAAGGTTCGTATGCATTATGGTCATCCTGATGTTTTTGATAGAGTGTTTCATATAACCCGCGGTGGTATCAGCAAGGCTTCCCGTGTTATCAATATTAGTGAAGATATCTACTCAGGATTCAATTCAACCTTGCGTCAAGGAAACATTACTCATCATGAATATATTCAGGTTGGAAAGGGAAGAGATGTTGGCCTCAATCAGATTGCACTATTTGAGGGGAAAGTTTCAAGTGGCAATGGTGAACAAGTTCTGAGTCGGGATATATACAGACTCGGGCAACTTTTTGATTTCTTCCGGATGATGTCTTTCTACTTCACAACAGTTGGATACTACTTTTGTACCATGTTAACGGTGCTGACAGTTTATGCGTTTCTTTATGGAAAAACATATTTGGCACTCTCTGGTGTTGGTGAAACAATTGAAGAAAGGGCTAAGATAACCAAGAATACTGCTCTGAGTGCTGCTTTGAATACACAGTTTCTCTTCCAAATTGGTATCTTTACTGCTGTGCCAATGGTCTTGGGCTTCATTCTTGAACAAGGCTTCTTGAGGGCCGTTGTCAATTTTATCACGATGCAGTTTCAGCTCTGCACTGTTTTTTTCACTTTTTCTTTGGGTACAAGAACCCATTATTTTGGAAGGACAATTCTTCATGGCGGTGCAAGGTATCAAGCAACTGGCCGAGGGTTTGTCGTCCGCCATATCAAATTTTCTGAAAATTACAGACTCTACTCTCGTAGCCATTTTGTTAAAGGGTTGGAAGTTGTGCTTCTGTTGATAGTATATCTTGCTTATGGTTATAATGATGGTGGTGCACTGTCATACATTCTTTTGAGTATAAGCAGTTGGTTTATGGCTCTATCCTGGTTGTTTGCTCCATATTTATTCAACCCTTCTGGATTTGAGTGGCAAAAGGTAGTGGTAGACTTCCGAGACTGGACAAATTGGCTACTTTACAGAGGTGGAATTGGTGTTAAGGGAGAAGAAAGCTGGGAAGCTTGGTGGGAAGAAGAACTGGCTCATATCAGGAGCTTCGGTTCAAGGATAGCAGAGACCATCCTAAGTCTGAGATTTTTCATTTTTCAATATGGTATTGTGTACAAGCTGGACGTGAAAGGAACTGATACTTCATTGACGGTGTATGGATTCTCATGGGTAGTGCTGGCAGTACTAATAATTCTCTTTAAGGTATTCACCTTTAGCCAGAAGATATCAGTCAATTTCCAGCTTCTGCTGCGCTTTGTACAAGGAGTATCACTCTTGTTTGCACTTGCTGGTTTGGCTGTAGCAGTTATATTAACCGACCTATCGGTTCCAGACATATTTGCTTCTATTTTAGCATTCATTCCTACTGGGTGGGGAATTTTATCGATTGCTGCTGCTTGGAAGCCTGTGATGAAGAGGTTAGGACTATGGAAGTTCATTCGATCAATTGCACGTCTATATGATGCTGGCATGGGAATGCTCATATTTGTGCCCATTGCATTCTTTTCGTGGTTTCCATTTGTATCAACATTTCAAACTCGCCTCATGTTTAACCAGGCTTTTAGCCGAGGGTTAGAAATTTCTTTGATCCTTGCTGGGAACAATCCCAATACTGGGATATAG 5283 0.4003 MQKVSLHMDLYDRLERKTVKRKRVFATLKVLGTVLEQLAEEIPVELKRVMESDSASTEDLIAYNIIPIDAASSTNAIVFFPEVQAAISSLNYFNGLPELPRAYFISPTRNANMLDFLQYTFGFQKDNVANQREHIVHLLANEQSRLGVPDKTEPKLDEAALQKVFLKSLENYINWCNYLCITPVWSSLEAVSKEKKLLYVSLYLLIWGEASNVRFLPECLCYIFHHMAREMDEILRQQIAQTANSCTSENGVSFLDHVILPLYDVISAEATNNDNGKAPHSSWRNYDDFNEYFWSLHCFELSWPWRKSSSFFQKPHPRSKKMLAGRSQRQGKTSFVEHRTFFHLYHSFHRLWIFLFMMFQGLAIIAFNDGKFNSKTLREVLSLGPTFVVMKLFESVLDIFMMYGAYTTTRRSALSRIFLRFLWFSLASVFVTFLYVKALQEESKRDSNSVIFRFYVIVVGIYAGVQFFISFLMRIPACHLLTNQCDRWPLIRFVKWLRQERHYVGRGMYERSLDFIKYMLFWLVILSAKFSFAYFLQIKPLVKPTRDIIKEKNLVYSWHDFVSKNNHNALTIVSIWSPVVCIYLLDIYVFYTLVSAVWGFLLGARARLGEIRSLEALQKLFEQFPGAFMDTLHVALPNRSAQLSSVQVVEKNKVDAARFSPFWNEIIRNLREEDYITNFELELLLMPRNSGDIPLVQWPLFLLASKIFLARDIAVESKDTQDELWDRISRDDYMMYAVQECYYAIKLILTEVLDDAGRMWVERIYDDINASITKRSIHVDFRLNKLAVVISRITALMGILKETETPELEKGAVRAVQDLYDVVRYDVLSINMRDNYDTWSLLTKARDEGHLFQKLKWPNADLRMQVKRLYSLLTIKDSASSVPRNLEARRRLEFFANSLFMKMPRAKPVQQMLSFSVFTPYYSEIVLYSMAELQKKNEDGISILFYLQKIFPDEWKNFLARIGRDENASDTDLFDSPSDILELRFWASYRGQTLARTVRGMMYYRKALMLQTYLERTTAGGDLEAGLGFDEVSDTRGFDLSPEARAQADLKFTYVVTCQIYGKQKEEQKPEAVDIALLMQRNEALRVAFIDVVETLRDGKVNTEYYSKLVKADINGKDKEIYSVKLPGNPKLGEGKPENQNHAIIFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFHSDHGLRAPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVSSGNGEQVLSRDIYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGETIEERAKITKNTALSAALNTQFLFQIGIFTAVPMVLGFILEQGFLRAVVNFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLIVYLAYGYNDGGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQKVVVDFRDWTNWLLYRGGIGVKGEESWEAWWEEELAHIRSFGSRIAETILSLRFFIFQYGIVYKLDVKGTDTSLTVYGFSWVVLAVLIILFKVFTFSQKISVNFQLLLRFVQGVSLLFALAGLAVAVILTDLSVPDIFASILAFIPTGWGILSIAAAWKPVMKRLGLWKFIRSIARLYDAGMGMLIFVPIAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI 1760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06190 1760 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 75 1753 - -
Trre2g06190 1760 SMART FKS1_dom1_2 194 306 IPR026899 -
Trre2g06190 1760 Pfam 1,3-beta-glucan synthase component 882 1573 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Trre2g06190 1760 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 196 303 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06190 Trre-Chr2 66458236 66490327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06190 12 1760 Cell Wall Biosynthesis AT3G07160 76.451 0.0 2812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06190 K11000 - gmx:100787540 3182.5