Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06186 ATGTCTCAAGTTGAAGAACTATGGGAGCGGTTAGTTGAAGCTACTTTGAGAAATGCTAGAAAAAGTATTAGAGATATTGAAGAGATTTTAACAGTTGTAGAAGATGAAATTCAAGGCGATGATCCCACGGTCTCTCGAATATTATGTGAGCATGCATATTCATTATCTCAAAAGTTGGACCCCGATAGTGAAGGCCGAGGTGTTTTACAATTCAAGACCGGTTTGATGTCTGTCATTAAGCAAAAGGTGGCTAAAAGGGACGATGGAACCATTGATAGAAGTAAGGACATCACCCAATTACAAGAGTTCTACCAGAGTTACAGAAAGAAGAATAATGTAGATGATGAGGAGGAAATGCAGTTCAGGGAATCTGAACAAAATCTTGACGAGTTGGAGTGTAAGACTGAAAAAAGGAAAAGGGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTGCTTAAGCAATTGACTGAAGAAATTCCTTATGAGCTTAACCAGGTTATTGAATCAGATTCTACATCGACAGAGGATCTGATCGCTTACAACATCATCCCTATAGATGCTACTTCTTCAACAAATGCTATTGTCTTTTTTACTGAGGTGCAAGCAGCAGTTTCAGCTCTCAAGTATTTCAGTGCCTTGCCTAAACTGCCCAATGCTTATTTCATTTCTCCTACAAGGAATGCCAACATATTCGATTTTCTGCAGTATACTTTTGGATTTCAGAAAGATAATGTAGCTAATCAGTGTGAACACATGGTTCATCTTCTCGCAAATGAGCAATCGCTGCTTGGAGTTCCAGAAAAAACCGAACCTAAACTTAATGAAGAAGCCTTGGAGAAAGTATTCCTCAAGTCCCTTGAGAATTACATAAATTGGTGCAACTACTTATGCATTCAGCCTGTTTGGAGCAGTTTGGAGGCTGTTAATGAAGGGAAGAAATTGTTGTATGTTTCTTTATACCTCCTAATATGGGGCGAAGCTTCAAATGTCAGATTTTTACCAGAATGTTTGTGCTACATATTCCATCAAATGGCTAGAGAGATGGATGAAATCTTAAGGCAGCAAATTGCTCAGACAGCCAATAGTTGCACTTCTGAGGACGGTGTCTCATTTCTTGATCATGTTATCCTTCCTCTCTATGACGTTATTTCTGCAGAAGCTGAAAACAATGATAATGGAAAGGCGCCTCATTCATCCTGGAGAAATTATGACGATTTTAATGAGCATTTCTGGTCACTACATTGCTTTGAGCTTAGCTGGCCATGGCGCAAAAGTTCTCCATTTTTCCAAAAGCCGCATCCCAGATCGAAGAAAATGCTATCTGGCAGAAGTCAACGTCAGGGGAAAACATCTTTTGTGGAGCATCGGACTTTTTTTCATCTTTATCATAGTTTCCACCGATTGTGGATATTTCTTTTCATGATGTTCCAGGGTCTGGCAATAATTGCTTTCAATGATGGAAAATTTAATGGCAAAACCTTTCGAGAGGTTCTTAGTCTTGGACCTACGTTTGTTGTGATGAAATTTTTCGAGAGTGTCCTGGACATTTTCATGATGTATGGAGCATATACAACGATGAGACGCTTAGCTCTAATTCGAATTTTTCTAAGATTTCTTTGGTTTGGCCTGACTTCAGTTTTTGTGACTTTCCTTTATATAAAAGCACTCCAAGTAGAGAGTAAAAGAGATTCAAATTCAGTTATTTTCATATTATATGTGATTGTTATTGGGATTTATGCCGGTGTCCAGCTTTTCATTAGTTTCCTCGAGCTGATTCCTGCATGTCATCTTCTGATGAACCGGTGTGATCATTGGCCTCTCATTCGCTTTGTGAAGTGGCTGCAGCGCCAGGAACGACATTATGTTGGATGGGGATTGTATAAAAGGCGTTTGGATTTCATAAAGTATATGCTGTTTTGGCTTGTTATTTTGAGTGCAAAATTTTCGTTTGCTTACTTTCTTCAGATCAAGCCACTAGTTGACCCGACAAGGGATATAATAAAAGTGAATACTATAGTTTACTCGTGGCCTGATTTTGTTTCTAAAAATAATCACAATGCTTTGACAGTTATTAGCATATGGATTCCAGTGTTTTTCGTTTATCTACTGGACATGTATGTGTTTTACACACTTGTATCGGCTGTCTGTGGATTCTTTCTTGGGGCAAGAGCTCGTCTGGGAAGGATAAGGTCACTAGAAGCGCTGCAAAAATGTTTTAAGCAGTTTCCGGGAGCTTTCATGGACACTCTTCATGTTGCTTTACCCAACAGGAGTGCCCAACCATCATCTGTTCAGGTTGTTGAAAATAGCAAGGTTGATGCTGCTCGGTTCTCCCCATTTTGGAATGAGATTATTAGAAATCTAAGGGAGGAAGACTATATAACCAACTTTGAAATGGAGTTGCTCGTAATGCCAAGAAATTCTGGAGATATTCCTTTGGTTCAGTGGCCACTTTTTCTACTTGCAAGCAAGATAATTTTCGCTGTGAATATTGCTGTTGAGAGTAAAGACACTCAAGATAAGGTTTGGAATAGGATTTCACGCGATGACTATATGATGTATGCAGTTCAGGAGTGTTACTATGCAGTTAAACTCATTTTAACAGAAGTATTAGATGATGCAGGAAGGATCTGGGTTGAAAGGATATATGATGATATTAATGCTAGTATCACAAAAAGGAGTATTCATGTGGACTTTCGACTAAATAAGTTGGCTGTTGTGATATCTAGAATAACTGCATTGATGGGGATTCTGAAAGAGACTGAAAAACCTGAGCTTGAAAGAGGTGCAGTTAGCGCTGTTCAGGATCTCTATGATGTTGTACGATATGATGTCCTTTCTATTCATATGAGGGATTATTATGACACGTGGAGTTTACTGACCAAAGCAAGAGATGAAGGGCATTTGTTTCAAAAGTTGAAATGGCCAACTGCAGACTTAAGAATGCACATCAAAAGATTATATTCATTGCTGACTATCAAAGACTCTGCATCAAGCGTTCCTAGAAATCTTGAGGCTAGGCGAAGGCTTGAGTATTTTACAAATTCACTCTTTATGAAGATGCCTCGTGCAAAGCCAGTTCGACAAATGTTATCTTTTAGTGTTTTCACGCCTTACTGTTCTGAGATTGTGCTTTATAGCATGGATGAACTCCTAAAGAAAAATGAAGATGGCATTTCAATTTTGTTCTACCTTCAGAAAATATTTCCAGATGAGTGGAAAAACTTTCTTGTCCGAATCGGACGTGATGAAAATGCAAGTGACTTTGATCTTTTCAATAGTCCTGGTGATATTCTTGAACTGCGTTTTTGGGCTTCTTATCGGGGGCAAACATTGGCCAGAACTGTTCGGGGAATGATGTATTATAGGAAGGCTCTTATGCTTCAGACCTATCTGGAGAGGAAAATGGCTGGAGATTTGGAGGCTGGAGTTGGTTTTTATGAAGTATCTGATACACATGGCTTTTATTTATCCCCTGAAGCACATGCTCAGGCGGATCTGAAGTTCACTTATGTTGTGACATGTCAAATGTATGGTAAACAGAAAGAGGAGCAAAAGCCCGAAGCTGTCGATATCGCTTTACTTATGCAAAGAAATGAAGCGCTTCGTGTTGCTTTCATTGATGTTGTTGAAAACTTAAGATATGGAAAAGTGAACACGGAATACTACTCAAAGCTTGTAAAAGCTGATATTAATGGGAAAGACAAGGAAATATACTCGGTGAAATTACCTGGAAATCCCAAACTTGGTGAAGCGAAGCCTGAGAATCAAAATCATGCAATTATATTTACCCGTGGGAATGCAGTTCAAACAATTGACATGAATCAGGATAACTATTTTGAGGAGGCTTTGAAGATGAGGAATCTTCTTGAGGAATTTCATTCTGATAATGGTCTTCGTCCTCCCACCATACTTGGTGTTAGAGAGCATGTCTTTACTGGAAGTGTATCATCTTTGGCTTCATTCGTGTCCAATCAAGAAACAAGTTTTTCAACTTTGGGTCAGAGGGCTTTAGCAAATCCCTTGAAGGTTCGTATGCATTGTGGTCATCCTGATGTTTTTGATAGAGTGTTCCACATAACCCGTGGTGGCATCAGTAAGGCTTCCCGTGTTATCAATATTAATGAAGATGTCTACTCAGGATTCAATTCAACCTTGCGTCAAGGAAGCGTTACTCATCATGAATATATTCAGGTTGGTAAGGGAAGAGATGTTGGCTTCAATCAGATTGCACTATTTGAGGGGAAGGTTTCAAGTGGCAATGGTGAACAAGTTCTGAGTCGGGATATATACAGACTTGGGCAACTTTTTGATTTCTTCCGGATGATGTCTTTATACTTCACAACCGTTGGATACTACTTTTGTAGCATGTTAACGGTGCTTACGATTTATGCCTTTCTTTATGGAAAAATGTATTTGGCACTCTCTGGTGTTGGTGAAACAATTGAAGAAAGGGCTAAGATAACTAAGAACACTGCTCTGAGTGCTGCTTTGAGTACACAGTTTCTCTTCCAAATTGGTATTTTCACTTCTGTGCCAATGGTCTTGGGCGTCATTCTTGAACAAGGCTTCTTGAGGGCCGTTGTCAATTTTGTCACAATGCAGTTTCAGCTATGCACTGTTTTTTTTGCTTTTTCTTTGGGTACAAGAACCCATTATTTTGGAAGGACAATTCTTCATGGCGTTGCTAGGTATCAAGCCACTGGCCGGGAGTTTGTCGTCCGCCATATCAAATTTTCCGAAAATTACAGACTCTACTCTCGTAGTCATTTTGTTAAAGGGTTCGAAGTTGTGATTCTATTGATAGTATCTCTTGCTTATGGCTACAATGAATGTGGTGCAACGTCGTACATTCTTTTGAGTATAAGCAGTTGGTTTATCGCTCTATCCTGGTTGTTTGCTCCATATTTATTCAACCCGTATGGATTTGAGTGGCGAAAGGTCGTGATAGACTTCCGAGACTGGAAAAATTGGCTACTTTACAGTGGTGGAATTGGTGTTGAGGGAGAAGAAAGCTGGGAAGCTTGGTGGGAAGAAGAACTGGCTCATATCAGGAGCTTGAGTTCAAGGATAGCAGAGACCATCCTGAGTCTGAGATTTTTCATTTTTCAATATGGTATTGTATACAAGCTTAACTTGAAAAGAACGGATACTTCATTGACGGTTTATGGATTCTCATGGGCAGTGTTGGCAATGCTACTAATTCTTTTTAAGGTATTCACTTTTATCCCGAAGATATCAGTCAAATTTCGGTTTGTGTTGCGCTTTGTACAAGGACTATCCCTCTTGTTGGTAGTGGCTGGTTTGGCTGTAGCAGTTAGATTAACTGACCTATCCGTAGCAGACATATTTGCTTCCATTTTAGCATTCATTCCTACTGGATGGGGAATTGTATCGATTGCTGGTTCTTGGAAGCCTGTGATGAAGAGGCTAAGACTATGGGAGTTCATTCGATCAATTGCTCGCGTATATGACGCTGGCATGGGAATGCTCACTTTTGTGCCCACTGCATTATTTTCCTTGATTTCCATTTGTCCCAACATTTCAAACTCTCCTCCTCATGTTTAA 5568 0.3953 MSQVEELWERLVEATLRNARKSIRDIEEILTVVEDEIQGDDPTVSRILCEHAYSLSQKLDPDSEGRGVLQFKTGLMSVIKQKVAKRDDGTIDRSKDITQLQEFYQSYRKKNNVDDEEEMQFRESEQNLDELECKTEKRKRVFATLKVLGTVLKQLTEEIPYELNQVIESDSTSTEDLIAYNIIPIDATSSTNAIVFFTEVQAAVSALKYFSALPKLPNAYFISPTRNANIFDFLQYTFGFQKDNVANQCEHMVHLLANEQSLLGVPEKTEPKLNEEALEKVFLKSLENYINWCNYLCIQPVWSSLEAVNEGKKLLYVSLYLLIWGEASNVRFLPECLCYIFHQMAREMDEILRQQIAQTANSCTSEDGVSFLDHVILPLYDVISAEAENNDNGKAPHSSWRNYDDFNEHFWSLHCFELSWPWRKSSPFFQKPHPRSKKMLSGRSQRQGKTSFVEHRTFFHLYHSFHRLWIFLFMMFQGLAIIAFNDGKFNGKTFREVLSLGPTFVVMKFFESVLDIFMMYGAYTTMRRLALIRIFLRFLWFGLTSVFVTFLYIKALQVESKRDSNSVIFILYVIVIGIYAGVQLFISFLELIPACHLLMNRCDHWPLIRFVKWLQRQERHYVGWGLYKRRLDFIKYMLFWLVILSAKFSFAYFLQIKPLVDPTRDIIKVNTIVYSWPDFVSKNNHNALTVISIWIPVFFVYLLDMYVFYTLVSAVCGFFLGARARLGRIRSLEALQKCFKQFPGAFMDTLHVALPNRSAQPSSVQVVENSKVDAARFSPFWNEIIRNLREEDYITNFEMELLVMPRNSGDIPLVQWPLFLLASKIIFAVNIAVESKDTQDKVWNRISRDDYMMYAVQECYYAVKLILTEVLDDAGRIWVERIYDDINASITKRSIHVDFRLNKLAVVISRITALMGILKETEKPELERGAVSAVQDLYDVVRYDVLSIHMRDYYDTWSLLTKARDEGHLFQKLKWPTADLRMHIKRLYSLLTIKDSASSVPRNLEARRRLEYFTNSLFMKMPRAKPVRQMLSFSVFTPYCSEIVLYSMDELLKKNEDGISILFYLQKIFPDEWKNFLVRIGRDENASDFDLFNSPGDILELRFWASYRGQTLARTVRGMMYYRKALMLQTYLERKMAGDLEAGVGFYEVSDTHGFYLSPEAHAQADLKFTYVVTCQMYGKQKEEQKPEAVDIALLMQRNEALRVAFIDVVENLRYGKVNTEYYSKLVKADINGKDKEIYSVKLPGNPKLGEAKPENQNHAIIFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFHSDNGLRPPTILGVREHVFTGSVSSLASFVSNQETSFSTLGQRALANPLKVRMHCGHPDVFDRVFHITRGGISKASRVININEDVYSGFNSTLRQGSVTHHEYIQVGKGRDVGFNQIALFEGKVSSGNGEQVLSRDIYRLGQLFDFFRMMSLYFTTVGYYFCSMLTVLTIYAFLYGKMYLALSGVGETIEERAKITKNTALSAALSTQFLFQIGIFTSVPMVLGVILEQGFLRAVVNFVTMQFQLCTVFFAFSLGTRTHYFGRTILHGVARYQATGREFVVRHIKFSENYRLYSRSHFVKGFEVVILLIVSLAYGYNECGATSYILLSISSWFIALSWLFAPYLFNPYGFEWRKVVIDFRDWKNWLLYSGGIGVEGEESWEAWWEEELAHIRSLSSRIAETILSLRFFIFQYGIVYKLNLKRTDTSLTVYGFSWAVLAMLLILFKVFTFIPKISVKFRFVLRFVQGLSLLLVVAGLAVAVRLTDLSVADIFASILAFIPTGWGIVSIAGSWKPVMKRLRLWEFIRSIARVYDAGMGMLTFVPTALFSLISICPNISNSPPHV 1855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06186 1855 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 119 1844 - -
Trre2g06186 1855 Coils Coil 114 134 - -
Trre2g06186 1855 Pfam 1,3-beta-glucan synthase component 1000 1687 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Trre2g06186 1855 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 313 420 IPR026899 -
Trre2g06186 1855 Coils Coil 16 36 - -
Trre2g06186 1855 SMART FKS1_dom1_2 311 423 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06186 Trre-Chr2 66415381 66431982 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06186 1 1840 Cell Wall Biosynthesis AT3G07160 71.032 0.0 2724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06186 K11000 - gmx:100811473 3019.57