Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06176 ATGGCTATATCATCATCATTGCCAACCAATAATAATAGCCTGTTCTCAGTCTCAGCAGGACCACATCTTTTGAAAATTGAGTGGAGTTCCCGTGCCAACGATAGCCATGGCAACCGAGGTGCAAGAAGTTCTACCACCACCTCTTACTTCAACTTCACCCCCCCACCTTCCTTATTTGATGGAACTACCAGGTTGTATATCTCCTACAAATGCCCCTATGCTCAACGTGTATGGATCGCCCGTAACTCTAAGGGATTGCAGGACAAGATAGAGTTGGTTCCAATTGATTTACAAGACAGGCCTTCCTGGTATAAGGAGAAAGTCTACCCAGCCAACAAGGTTCCATCTCTAGAACACAATAATGAAGTTAGAGGAGAGAGTCTTGATCTGATTAAATATATTGACACTCACTTTGAAGGCCCCTCCCTTTTCCCTACTGAACCTGATGATAAGGAATTTGCTGAAGAGTTGCTATCTTACACGGATACATTCTACAAGACCGTAGTTTCTTCGTTTAAAGGAGGAGATGTGACTGAGGCTGGGACTGCATTTGATTATCTTGAGACTGTTCTCTCCAAATATGATAATGGACCTTTCTTCCTTGGCCAATTCAGTCTGGTGGATATAGCATATGCGCCTTTCATAGAAAGATTTCAACCATTTTTAAAGGATGTGAAAAATTATGACATTACAATAGGCAGGCCTAAACTGGCAGCATGGATTGAGGGAATAAACAACATCGAAGGCTACAAAATAACCCGTTCTGATCCCAAGGAGCTTGTTGAAAGTTACAAGAAGCGCTTCCTGGTATCATAA 816 0.4228 MAISSSLPTNNNSLFSVSAGPHLLKIEWSSRANDSHGNRGARSSTTTSYFNFTPPPSLFDGTTRLYISYKCPYAQRVWIARNSKGLQDKIELVPIDLQDRPSWYKEKVYPANKVPSLEHNNEVRGESLDLIKYIDTHFEGPSLFPTEPDDKEFAEELLSYTDTFYKTVVSSFKGGDVTEAGTAFDYLETVLSKYDNGPFFLGQFSLVDIAYAPFIERFQPFLKDVKNYDITIGRPKLAAWIEGINNIEGYKITRSDPKELVESYKKRFLVS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06176 271 FunFam Lambda class glutathione S-transferase 140 271 - -
Trre2g06176 271 PANTHER GLUTATHIONE S-TRANSFERASE L1 54 268 IPR044629 GO:0004364
Trre2g06176 271 SFLD Main (cytGST) 64 244 - -
Trre2g06176 271 CDD GST_C_Lambda 147 265 - -
Trre2g06176 271 FunFam Glutathione S-transferase L2, chloroplastic 38 139 - -
Trre2g06176 271 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 120 268 IPR010987 -
Trre2g06176 271 Pfam Glutathione S-transferase, N-terminal domain 65 141 IPR004045 -
Trre2g06176 271 Pfam Glutathione S-transferase, C-terminal domain 177 242 - -
Trre2g06176 271 Gene3D Glutaredoxin 40 139 - -
Trre2g06176 271 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 61 142 IPR004045 -
Trre2g06176 271 SUPERFAMILY Thioredoxin-like 55 143 IPR036249 -
Trre2g06176 271 Gene3D - 140 271 - -
Trre2g06176 271 SFLD Glutathione Transferase (cytosolic) 64 244 IPR040079 -
Trre2g06176 271 SUPERFAMILY GST C-terminal domain-like 138 268 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06176 Trre-Chr2 66330974 66333176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06176 55 267 Glutathione S-transferase Gene Family AT3G55040 68.545 9.92e-107 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06176 K00799 - ming:122093307 361.688