Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06145 ATGCATAATACGATATTTTGGAATGAAAGTGAGTTGGAGATGATTCGTCAAAGTTCTGTTTATCAGGAAACTATTTACCAAAAGTCTCAAATCGAAAAGGACTATTTGGCAATCAGGCCTGTTTTAAAATCATTTTGTCAAACTTTTGGAGATTTTACCTGCAAGGACTTCATGCACGCATGCGCACAAGTTGGCTCTAGAGCATGGGGAAGCACAAAGGGTTTATCTCTGATTCCATTTGCAGATTTCTTAAATCATGATGGGATTTCAGAAGCAATTGTAATGAGCGATGACAACAAGCAATGCTCAGAAGTTATCGCTGACCGTGATTATGTTCCTGGTGAACAGGTACTTATAAGATATGGAAAGTTTTCAAATGCTACATTGATGCTGGACTTTGGTTTTACAATTCCATACAACATTTATGATGAGGTTCAGATCCATTGTGATATACCTAAGCAAGATCCTCTGCGTGAATTGAAATTAGAACTCTTGCAGCAATACTTTGTGCCTCCAATCAAAGAGGCAAAGTGCTTGAAGTATTCTGTGAATTCCTTCACAATCAAGGAGGTGAAGTCTGCTAGAGGGAAAGGGAAGGGTGTGCCACAATCACTTCGTGCACTTGCTCGTGTTCTTTCTTGTACCACGCCACAAGAGCTTAACTATCTGGTTATGGAGGCTGCACAAACTGATGGTAGGCTGGCTAGGCGGCCTTTACCGGATATGAACAAAGAGATACAAGCACACAAGATATTATCCTCATTATTCATCCAATTAATTGAGGAGCGCAATGCAACTATTATGTCATTTGATTCTTGCAATTCGTCATCCTTGTGCCAAAGACTTCCTGTTAGAAGACAAATGGCTCAAGATCTCCTACATGGGGAGCTTCGCATTCTCAAATCTGCTTCTGCCTGGCTGGAGAATTACTGTTTTTTCTTGACTTGA 948 0.404 MHNTIFWNESELEMIRQSSVYQETIYQKSQIEKDYLAIRPVLKSFCQTFGDFTCKDFMHACAQVGSRAWGSTKGLSLIPFADFLNHDGISEAIVMSDDNKQCSEVIADRDYVPGEQVLIRYGKFSNATLMLDFGFTIPYNIYDEVQIHCDIPKQDPLRELKLELLQQYFVPPIKEAKCLKYSVNSFTIKEVKSARGKGKGVPQSLRALARVLSCTTPQELNYLVMEAAQTDGRLARRPLPDMNKEIQAHKILSSLFIQLIEERNATIMSFDSCNSSSLCQRLPVRRQMAQDLLHGELRILKSASAWLENYCFFLT 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06145 315 SUPERFAMILY SET domain 2 140 IPR046341 -
Trre2g06145 315 Gene3D - 138 310 IPR036464 -
Trre2g06145 315 Gene3D set domain protein methyltransferase, domain 1 1 135 - -
Trre2g06145 315 Pfam Rubisco LSMT substrate-binding 152 300 IPR015353 -
Trre2g06145 315 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 264 - -
Trre2g06145 315 Pfam SET domain 5 122 IPR001214 GO:0005515
Trre2g06145 315 FunFam Predicted protein 138 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06145 Trre-Chr2 66152265 66158526 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre2g06145 Rubis-subs-bind 7.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06145 K19199 - gmx:100818002 482.641