Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06132 ATGGCTTCAAGTTCTCTTAAAGGCTTTGTTTGGTTGCTATTCATTACATGTATGATTGGGATAAGTTCAACTCAATTATCCAATGAAATGTTCTATGCTAGAACTTGTCCAAAAGCACTACGTACAATTAGGAAAACAGTGCAGGATGTTGTCAAGAATGAGAGACGCATGGGAGCATCCTTGCTCCGTCTCTTTTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCCGTATTGTTAGACGACACCTCAAATTTCACAGGTGAGAAGAATTCATTTCCAAATGCAAACTCTCTAAGAGGTTTTGAGGTAATTGATGACATCAAAAAACAATTGGAGACTATGTGTCCCAATGTTGTCTCTTGTGCTGACATCTTAGCCCTTTCTGCTAGGGACGCTGTTGCTGAGCTTGGTGGACAAAGATGGGATGTACCATTGGGCAGAAGAGATTCATTAACAGCAAGCTTAGAGGAATCAAATTCTGACTTACCTGCTCCCTTTTTGGATCTTGATGGCCTTATCGCTGCATTCCAAAAGAAAAATTTCTCAACCGAAGAAATGGTTACTTTATCAGGTGCTCACACAGTAGGGCAAGTGAGGTGCTTATTATTTAGAGCAAGAGTATACAATGAAACAAACATAGACCCAACATTTGCTGCAGCAATGCAAGCAGCATGTCCTTTTGAAGGGGGTGATAATAATTTATCACCTTTTGATTCTTCCACACCAACTAATTTTGACAATGCTTTCTATGGTAACTTGCTGAAAAGTAAGGGTCTAGTACATTCCGATCAACAACTATTTGGGAATGGATCATCCACAACAAGTGCTCAAGTAAGAACATATAGTAGAAATATGGGACGTTTCAAAAAAGACTTTGCAAATGCAATGTTTAAGATGACATTGCTTACACCACTTACTGGCACTGATGGTGAGATTAGGCAAAATTGCAGGGTCATCAATGCTCCATCAAACACTACCACCACTGCTTAA 993 0.3958 MASSSLKGFVWLLFITCMIGISSTQLSNEMFYARTCPKALRTIRKTVQDVVKNERRMGASLLRLFFHDCFVQGCDASVLLDDTSNFTGEKNSFPNANSLRGFEVIDDIKKQLETMCPNVVSCADILALSARDAVAELGGQRWDVPLGRRDSLTASLEESNSDLPAPFLDLDGLIAAFQKKNFSTEEMVTLSGAHTVGQVRCLLFRARVYNETNIDPTFAAAMQAACPFEGGDNNLSPFDSSTPTNFDNAFYGNLLKSKGLVHSDQQLFGNGSSTTSAQVRTYSRNMGRFKKDFANAMFKMTLLTPLTGTDGEIRQNCRVINAPSNTTTTA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06132 330 ProSiteProfiles Plant heme peroxidase family profile. 31 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 Gene3D Peroxidase, domain 2 164 300 - -
Trre2g06132 330 CDD secretory_peroxidase 31 320 IPR033905 GO:0004601|GO:0042744
Trre2g06132 330 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Trre2g06132 330 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 FunFam Peroxidase 30 167 - -
Trre2g06132 330 SUPERFAMILY Heme-dependent peroxidases 31 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 Pfam Peroxidase 44 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g06132 330 Gene3D - 31 318 - -
Trre2g06132 330 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trre2g06132 330 FunFam Peroxidase 164 300 - -
Trre2g06132 330 PANTHER PEROXIDASE 72-RELATED 23 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06132 Trre-Chr2 66029881 66032172 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06132 31 317 Peroxidase AT5G05340 55.709 2.88e-116 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06132 K00430 - gmx:100802244 481.485