Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06122 ATGATTTCAGACACCGACTGTGTGGAACATTCCACCGCGGCAACTACCGCCGGCGGAGAAAAAACCTCCGCATATTCCGTTAAAGATCACACCGCACCGCCGGCAGCTCAAAATATTGTGATGTCTTCCAGAGATAACGATTCTCTCTTCAGCGGTGGTGGAATCAGCTTTCTATCTGGAAGTCGAAATGGAAGGATCAGCTATGGTTATTCCAGTATCAAGGGTAAAAGATCTTCAATGGAGGATTTCTTTGAGACCAAAATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTTGGTGTTTTTGATGGCCATGGAGGATCACGGACTGCAGAATACCTGAAAAATAATTTATTCAAGAACTTGAGTAGCCATCCTGACTTTATCAAAGACACAAAGACAGCTATTGTTGAAGCATTTAAACAAACAGACGTTGATTACCTCAATGAGGAAAAGGGACATCAAAGGGATGCTGGGTCCACTGCATCAACAGCTTTGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGTGATTCCCGAGTAGTTGCATCTAGAGCTGGTTTAGCTGTTCCTTTATCTGTTGATCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAACAGGCTGGGGGATTTGTTATCTGGGCAGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAGCTTCTTAAGCCATACGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGAAGGCGTGGATTTTATAATAGTTGCAAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTGGTACAAAATATCACTGATGCAGAAGTGGCATCTAAAGAACTTATTAAAGAAGCTTATACTCGAGGAAGCTCGGACAACATTACTTGTGTTGTTGTTCGATTTGATCCATCTTGA 948 0.4314 MISDTDCVEHSTAATTAGGEKTSAYSVKDHTAPPAAQNIVMSSRDNDSLFSGGGISFLSGSRNGRISYGYSSIKGKRSSMEDFFETKISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTALLLGDRILVANVGDSRVVASRAGLAVPLSVDHKPDRSDERQRIEQAGGFVIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIEGVDFIIVASDGLWNVISNKEAVSLVQNITDAEVASKELIKEAYTRGSSDNITCVVVRFDPS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06122 315 Pfam Protein phosphatase 2C 68 305 IPR001932 -
Trre2g06122 315 SUPERFAMILY PP2C-like 60 313 IPR036457 -
Trre2g06122 315 CDD PP2Cc 66 312 IPR001932 -
Trre2g06122 315 Gene3D - 60 315 IPR036457 -
Trre2g06122 315 ProSiteProfiles PPM-type phosphatase domain profile. 67 312 IPR001932 -
Trre2g06122 315 ProSitePatterns PPM-type phosphatase domain signature. 98 106 IPR000222 GO:0043169
Trre2g06122 315 SMART PP2C_4 56 310 IPR001932 -
Trre2g06122 315 PANTHER PROTEIN PHOSPHATASE 46 312 IPR015655 GO:0004722|GO:0006470
Trre2g06122 315 FunFam probable protein phosphatase 2C 59 59 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06122 Trre-Chr2 65930766 65934341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06122 39 315 PP2C-type Phosphatase Gene Family AT1G43900 73.646 6.35e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06122 K17506 - gmx:100776867 534.643