Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06121 ATGGAGAAAGGAAATGAGAGTAAAATGATTTCAGACACCGACTGTGTGGAACATTCCACCGCGGCAACTACCGCCGGCGGAGAAAAAACCTCCGCATATTCCGTTAAAGATCACACCGCACCGCCGGCAGCTCAAAATATTGTGATGTCTTCCAGAGATAACGATTCTCTCTTCAGCGGTGGTGGAATCAGCTTTCTATCTGGAAGTCGAAATGGAAGGATCAGCTATGGTTATTCCAGTATCAAGGGTAAAAGATCTTCAATGGAGGATTTCTTTGAGACCAAAATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTTGGTGTTTTTGATGGCCATGGAGGATCACGGACTGCAGAATACCTGAAAAATAATTTATTCAAGAACTTGAGTAGCCATCCTGACTTTATCAAAGACACAAAGACAGCTATTGTTGAAGCATTTAAACAAACAGACGTTGATTACCTCAATGAGGAAAAGGGACATCAAAGGGATGCTGGGTCCACTGCATCAACAGCTTTGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGTGATTCCCGAGTAGTTGCATCTAGAGCTGGTTTAGCTGTTCCTTTATCTGTTGATCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAACAGGCTGGGGGATTTGTTATCTGGGCAGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAGCTTCTTAAGCCATACGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGAAGGCGTGGATTTTATAATAGTTGCAAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTGGTACAAAATATCACTGATGCAGAAGTGGCATCTAAAGAACTTATTAAAGAAGCTTATACTCGAGGAAGCTCGGACAACATTACTTGTGTTGTTGTTCGATTTGATCCATCTTGA 972 0.429 MEKGNESKMISDTDCVEHSTAATTAGGEKTSAYSVKDHTAPPAAQNIVMSSRDNDSLFSGGGISFLSGSRNGRISYGYSSIKGKRSSMEDFFETKISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTALLLGDRILVANVGDSRVVASRAGLAVPLSVDHKPDRSDERQRIEQAGGFVIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIEGVDFIIVASDGLWNVISNKEAVSLVQNITDAEVASKELIKEAYTRGSSDNITCVVVRFDPS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06121 323 FunFam probable protein phosphatase 2C 59 67 322 - -
Trre2g06121 323 SUPERFAMILY PP2C-like 68 321 IPR036457 -
Trre2g06121 323 ProSitePatterns PPM-type phosphatase domain signature. 106 114 IPR000222 GO:0043169
Trre2g06121 323 SMART PP2C_4 64 318 IPR001932 -
Trre2g06121 323 Gene3D - 68 323 IPR036457 -
Trre2g06121 323 CDD PP2Cc 74 320 IPR001932 -
Trre2g06121 323 Pfam Protein phosphatase 2C 76 313 IPR001932 -
Trre2g06121 323 PANTHER PROTEIN PHOSPHATASE 49 320 IPR015655 GO:0004722|GO:0006470
Trre2g06121 323 ProSiteProfiles PPM-type phosphatase domain profile. 75 320 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06121 Trre-Chr2 65930742 65934341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06121 47 323 PP2C-type Phosphatase Gene Family AT1G43900 73.646 5.52e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06121 K17506 - gmx:100776867 534.643