Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g06060 ATGGAAGAGATGTTGGGTTCAGCTTCAACAACAACAACCATCAATTCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCATGGTTGGAAAGAAGGGACTGGTCTTGGGATCTCTGAGCAGGGTAGATTAGAACCGGTGGAAACTCGTATGAAGAATAATAAACGAGGTATAGGAGCAGATATAGTGAAGAAAAAGGTTGCGAGGCCTGACCGTGGTGATTCCTCCAAAGCAGACAATAAGCAGATAATTATTTTCTTAAGGTTTTCTTTTGATCTTAAAGGCTTTTAG 288 0.4028 MEEMLGSASTTTTINSSNIGFQLLKKHGWKEGTGLGISEQGRLEPVETRMKNNKRGIGADIVKKKVARPDRGDSSKADNKQIIIFLRFSFDLKGF 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g06060 95 ProSiteProfiles G-patch domain profile. 16 62 IPR000467 GO:0003676
Trre2g06060 95 Pfam G-patch domain 17 59 IPR000467 GO:0003676
Trre2g06060 95 PANTHER BAT4 PROTEIN-RELATED 7 77 IPR039146 -
Trre2g06060 95 SMART G-patch_5 14 60 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g06060 Trre-Chr2 65578590 65579083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g06060 3 58 C2H2 Transcription Factor Family AT5G26610 46.429 6.98e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g06060 - - cam:101497292 135.576