Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05997 | ATGGCGGAGGAAGAGAACGACGAAGTCACATTTACAGTCAAAATCACAGTCACACTCACCATTCCTCCTCCACAAACACAACAGCCTACTACTGTGGATGCTAACGCCGAAACAGTGCCGTCGAATGGTGATGAAGTGGCACGAGCTATTATATTATTAAGCGACGACGATGATGGTTCGGTTAAAGGTGATGACGTGGTAGTAATAGAAGATTCTGATAGTGATCGAGAAAAACAAGATATGGAAACAGCGTCGTTAAACAACGGCGATGATGTTGAAGCAGCTGAAGAAGAATCTGTTCCTGATCGCGAAAAACAAGCTACGGTGTCATTGACCGACGATGAACGTTCCGTTGAAGCTGACGACGTGGCAGCCGGAAGCTCTTCGTTTGGAAAGAAACGCGGCAGAAAGAGAAAAAAAGTGAAGGAAGCTGAAACGTATCCTTTAAGGGGAAATGCTAAGTGGATTGACGAGTCCAAGTCCACAACCACAATGTGCCATCAATGTCAAAGAAATGATAAGGGCAGGGTTGTCAGATGCACAAAATGCAAACGGAAAAGATTTTGCATACCTTGTTTAACTAATTGGTATCCTAAATTGAAAGAGAGTGATGTTGCCGAGGCGTGTCCTGTATGCCGTGATAATTGCAATTGCAAAGCATGCTTGCGATCTTTTAAAATCATCAATCAAATTAAGCATACGGCTAAAAGTAAAGCCAACAAAGACGAGGAGGTTGAGTTCTCTAAGTATTTGTTGAAAGGGCTTCTTCCATATTTAAGACAGTTGGATGAAGAACAGATGATTGAGAAGAAAAGAGAAGCCAATAGACAAGGGATCTCACTCTCAAAGCTAAAAATAAAATCGGCTGATTATTCTAAAGATGAGCGTGTGTACTGTGACAACTGCAAAACATCAATATTTGACTACCACAGAACCTGTACAAAATGCTCTTTTGACCTTTGCCTGCTGTGTTGCTGCGAGCTTCGTGGTGGGCAACTTCTAGGTGGTGCGGATCCAATTGAGCTCGAGTATATTTTCCGAGGTCGCGATTATCTACATGGTGGAACTGCAGAAAAACAGGTTAAAGGAAATGCATCACAGGCTCAAGACGAGCCTACGACTCGTGACTGGTCAAGATCTGGGTGGCGTGCAAATGGAGATGGTAGCATTCCTTGTCCGAAAGCCAATAATGAATGTGATCATGGTTTCCTTGAACTGAGAAGGATACTTCCTCCAAATTGCATCTCAGAGTTAGTATGTAAAGCAAAAGAACTTGCAGAAACATTTAAGCTGCAAGATGCAGAGGAGACTCTTGATAATGGGTGTTCCTGCTTGAAGCTTGTTAGGAACGCGAATGATATAAACAATAACACAAGGAAGGCAGCTTTTCGTGAAGATTCCGATGACAACTTTTTATTTTGTCCTAGAGCTGTAGATGTGCATCGTGAAGATTTAAGACATTTTCAGTGGCATTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTCGAATGTTCATCTGGTTTAAGTTGGGAACCGCTAGTCATGTGGCGTGCATTCCGTCAAATAACCAATTCCAAACACGATGTATTTTTGGATGTGAAGGCAGTTAATTGCTTAGATTGGTGTGAGGGAGATATTAATATCCACCAATTCTTTACTGGGTACATAAAAGGTCGAATGGATTGGCTTAATTGGCCTCAAGTGTTGAAATTAAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACTTTTACCTCGTCATCATGCTGAGTTCATATCTTTCTTGCCTTATAAAGAATATACAGATCCTTTCAAAGGTTCTCTCAACCTTGTTGTGAAGTTGCCGGATTATTGTGTAATGCCAGACATGGGGCCAAGAACATATATTGCTTATGGATTTGCTCAGGAGTTTGGACGTGGTGATTCCGTGACTAAGCTCCATTGTGATGCGTCTGATGCAGTAAATGTGTTGACTCATATCGCTAAAGTGGAACTGAAACCTGAGCAAATTGCTGCTATTAAGAAATTGGCACGTAGACACCTTGAGCAAGATAAGAGGGAGCTAAATGTTGATGGGAAGGTGGTTGAGATATTTCATCAGCACTCTGGCACTAATGATGATGACCTGTCTTGTAGGCCAGAACTCAAAGAGGTTGAGAAAGTAACAATGAAACAAGAAAACAGTTCATTTGCTGGAGGGGATTCCTTGGACGGTGCTCTCTGGGATATTTTTCGCAGAGAGGATGTACCCAAATTACAGGAATATATTAAGAAGTATTTCAGAGAGTTCAGTCATATCTATTGCAGTCCTTTAAAGCAGATTATTCACCCTATTCATGATCAAACCATTTATCTAACTATGGACCATAAGAAGAAACTTAACGAGGAGTATGGAGTTGAGCCTTGGACTTTTATTCAAAAATTAGGAGATGCCGTTTTCATTCCTGCTGGTTTGCCTCACCAAGTCAGAAATCTGAAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAACATATTGGCGAGTGCTTCCGTTTGACAGAGGAATGTCGCAAGCTTCCGATAAATCACAAATCAGCTGAGGACAAATTTGAGGTGAAGAAAATTGTCATACATGCTATGCTTGACGTGGTTGAAAAATTGGAGAAAGCAAGAATTGGGGAAACCAAGGTTCCTGTGTAA | 2691 | 0.4158 | MAEEENDEVTFTVKITVTLTIPPPQTQQPTTVDANAETVPSNGDEVARAIILLSDDDDGSVKGDDVVVIEDSDSDREKQDMETASLNNGDDVEAAEEESVPDREKQATVSLTDDERSVEADDVAAGSSSFGKKRGRKRKKVKEAETYPLRGNAKWIDESKSTTTMCHQCQRNDKGRVVRCTKCKRKRFCIPCLTNWYPKLKESDVAEACPVCRDNCNCKACLRSFKIINQIKHTAKSKANKDEEVEFSKYLLKGLLPYLRQLDEEQMIEKKREANRQGISLSKLKIKSADYSKDERVYCDNCKTSIFDYHRTCTKCSFDLCLLCCCELRGGQLLGGADPIELEYIFRGRDYLHGGTAEKQVKGNASQAQDEPTTRDWSRSGWRANGDGSIPCPKANNECDHGFLELRRILPPNCISELVCKAKELAETFKLQDAEETLDNGCSCLKLVRNANDINNNTRKAAFREDSDDNFLFCPRAVDVHREDLRHFQWHWSKGEPVIVSNVLECSSGLSWEPLVMWRAFRQITNSKHDVFLDVKAVNCLDWCEGDINIHQFFTGYIKGRMDWLNWPQVLKLKDWPPSDLFQELLPRHHAEFISFLPYKEYTDPFKGSLNLVVKLPDYCVMPDMGPRTYIAYGFAQEFGRGDSVTKLHCDASDAVNVLTHIAKVELKPEQIAAIKKLARRHLEQDKRELNVDGKVVEIFHQHSGTNDDDLSCRPELKEVEKVTMKQENSSFAGGDSLDGALWDIFRREDVPKLQEYIKKYFREFSHIYCSPLKQIIHPIHDQTIYLTMDHKKKLNEEYGVEPWTFIQKLGDAVFIPAGLPHQVRNLKSCIKVALDFVSPEHIGECFRLTEECRKLPINHKSAEDKFEVKKIVIHAMLDVVEKLEKARIGETKVPV | 896 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05997 | 896 | MobiDBLite | consensus disorder prediction | 359 | 380 | - | - | |
Trre2g05997 | 896 | PANTHER | JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN | 76 | 887 | IPR045109 | GO:0032454|GO:0033169 | |
Trre2g05997 | 896 | SMART | cupin_9 | 586 | 854 | IPR003347 | - | |
Trre2g05997 | 896 | MobiDBLite | consensus disorder prediction | 69 | 137 | - | - | |
Trre2g05997 | 896 | Pfam | Zinc-finger domain of monoamine-oxidase A repressor R1 | 161 | 236 | IPR018866 | - | |
Trre2g05997 | 896 | MobiDBLite | consensus disorder prediction | 22 | 38 | - | - | |
Trre2g05997 | 896 | MobiDBLite | consensus disorder prediction | 22 | 41 | - | - | |
Trre2g05997 | 896 | MobiDBLite | consensus disorder prediction | 69 | 84 | - | - | |
Trre2g05997 | 896 | ProSiteProfiles | Zinc finger RING-type profile. | 166 | 213 | IPR001841 | - | |
Trre2g05997 | 896 | MobiDBLite | consensus disorder prediction | 98 | 121 | - | - | |
Trre2g05997 | 896 | SUPERFAMILY | Clavaminate synthase-like | 484 | 877 | - | - | |
Trre2g05997 | 896 | MobiDBLite | consensus disorder prediction | 360 | 380 | - | - | |
Trre2g05997 | 896 | Gene3D | Cupin | 471 | 863 | - | - | |
Trre2g05997 | 896 | Pfam | JmjC domain, hydroxylase | 741 | 837 | IPR003347 | - | |
Trre2g05997 | 896 | ProSiteProfiles | JmjC domain profile. | 605 | 854 | IPR003347 | - | |
Trre2g05997 | 896 | FunFam | Transcription factor jumonji domain-containing protein | 469 | 863 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05997 | Trre-Chr2 | 65135419 | 65141067 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Jumonji | Trre2g05997 | JmjC | 3.2e-13 | CL0029 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05997 | K15601 | - | gmx:100780803 | 1054.66 |