Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05989 | ATGGTGACGGTGGCGATGGAAGACAACGAAAGCTGCGGCAGCGGAGTACACCACCGCACGTCGTCTTCTTCATCAATTCCGGGACAAAGTCGGCATCACCGCCAGAAACTAGAAGTGTACAATGAGATTCTCCGTCGCCTTAATGATTCCGGCAACGAAGAAGCTATGCAACCTGGCTTCAGCGATCAGCTTTGGGCTCACTTCAACCGTCTTCCTTCACGGTATGCGTTAGATGTGAATGTGGAAAGAGCTGAAGATGTTCTTATGCATAAGAGATTACTACATTTAGCACATGATCCTGCTAATAGGCCTCAAATTGAAATTCGCTTAGTTCAGCTTCATTCCTCATCTGATGAAAACACAGCCGACTCTTTCCAATCTTATGCTCCTGGTGAAGATTCTGTTCAAAGCTCTTCAAAGTACTCAAGCAGACAGGGTATACACCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGAAAATGATTCCGATGACTTAGAAGAGGAGCGATCTCTGCATGCCAGTGTACAATATACACGGCCCATGCATGAAATCACCTTCTCAACAGATGACAAGCCAAAGCTTCTCAGCCAGTTAACTGCTTTGCTTGCTGAGGTTGGACTGAACATCCAAGAGGCACATGCTTTTTCCACAACTGATGGTTACTCGTTAGATGTGTTTGTTGTTGAAGGATGGCCCTACGAGGAAACAGAGAAGCTAAAAGAAACTTTGGAAAAAGAAGTCTTGAAGATAGAGAAGAGACATGAGAGATCCAGTCAGCAATCAATAGCATCTGTTGATGAACATGATCAAGCAAGGATGAAAAATGAACTGGATCATTTGACAATTCCAAATGATGGGACAGATGTTTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGCATCTGCGTCATATGGTGAACTATTTAAAGGTACATATTGTAGCCAGGAAGTAGCCATCAAAGTTCTCAAGGCTGAGCATGTAAGTTCAGAAATGCAGAAAGAGTTTGCTCAGGAAGTCTACATCATGAGAAAGGTTCGACACAAGAATGTTGTGCAATTCATGGGAGCATGTACCAAGCCCCCACGCTTATGCATAGTTACAGAGTTTATGTCTGGTGGAAGTGTGTATGACTACCTACATAAGCAGAAAGGGTTTTTCAAATTTCCTACCCTGCTCAAAGTTGCAATTGATGTTTCTAAAGGAATGAACTACTTGCACCAACATAACATAATCCACAGAGACTTGAAGACTGCCAATCTTTTGATGGATGAAAACGGTGTTGTAAAGGTCGCCGATTTTGGGGTTGCTAGAGTGAAAACTCAGTCCGGAGTTATGACAGCCGAAACTGGGACATATCGTTGGATGGCTCCTGAGGTTATAGAACACAAGCCATATGATCACAAGGCTGATGTATTTAGTTTTGGAGTTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCGTACGAATATTTGACCCCTCTACAGGCAGCTATAGGAGTTGTTCAGAAGGGTTTACGGCCCACCATCCCCAAGAGCACTAATACAAAGTTTGTTCAAATTCTTGAGAGGTCTTGGCAGCAAGATCCAACTTTAAGACCCGATTTCTCTGAAATTATCGAGATCCTGCAGCAGTTGGCTAAGGAGGTTGGAGATGAAGGAGAGGGGCGCAAGGACAAATCGGGAGGATTTCTGTCTGTCCTCAGACGAGGTCATCACTAA | 1752 | 0.4366 | MVTVAMEDNESCGSGVHHRTSSSSSIPGQSRHHRQKLEVYNEILRRLNDSGNEEAMQPGFSDQLWAHFNRLPSRYALDVNVERAEDVLMHKRLLHLAHDPANRPQIEIRLVQLHSSSDENTADSFQSYAPGEDSVQSSSKYSSRQGIHPPPAFGSSPNLEALALEENDSDDLEEERSLHASVQYTRPMHEITFSTDDKPKLLSQLTALLAEVGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKETLEKEVLKIEKRHERSSQQSIASVDEHDQARMKNELDHLTIPNDGTDVWEIDPKHLKYGTQIASASYGELFKGTYCSQEVAIKVLKAEHVSSEMQKEFAQEVYIMRKVRHKNVVQFMGACTKPPRLCIVTEFMSGGSVYDYLHKQKGFFKFPTLLKVAIDVSKGMNYLHQHNIIHRDLKTANLLMDENGVVKVADFGVARVKTQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKSTNTKFVQILERSWQQDPTLRPDFSEIIEILQQLAKEVGDEGEGRKDKSGGFLSVLRRGHH | 583 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05989 | 583 | MobiDBLite | consensus disorder prediction | 561 | 583 | - | - | |
Trre2g05989 | 583 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 132 | 560 | - | - | |
Trre2g05989 | 583 | MobiDBLite | consensus disorder prediction | 120 | 157 | - | - | |
Trre2g05989 | 583 | CDD | ACT_TyrKc | 188 | 255 | - | - | |
Trre2g05989 | 583 | FunFam | Serine/threonine-protein kinase isoform 1 | 294 | 382 | - | - | |
Trre2g05989 | 583 | MobiDBLite | consensus disorder prediction | 561 | 576 | - | - | |
Trre2g05989 | 583 | Coils | Coil | 240 | 267 | - | - | |
Trre2g05989 | 583 | ProSiteProfiles | ACT domain profile. | 190 | 266 | IPR002912 | - | |
Trre2g05989 | 583 | MobiDBLite | consensus disorder prediction | 120 | 145 | - | - | |
Trre2g05989 | 583 | Pfam | Protein tyrosine and serine/threonine kinase | 304 | 553 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g05989 | 583 | SUPERFAMILY | ACT-like | 187 | 253 | IPR045865 | - | |
Trre2g05989 | 583 | Gene3D | Phosphorylase Kinase; domain 1 | 294 | 382 | - | - | |
Trre2g05989 | 583 | ProSiteProfiles | Protein kinase domain profile. | 304 | 557 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05989 | 583 | PRINTS | Tyrosine kinase catalytic domain signature | 461 | 471 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g05989 | 583 | PRINTS | Tyrosine kinase catalytic domain signature | 480 | 502 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g05989 | 583 | PRINTS | Tyrosine kinase catalytic domain signature | 415 | 433 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g05989 | 583 | PRINTS | Tyrosine kinase catalytic domain signature | 524 | 546 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g05989 | 583 | PRINTS | Tyrosine kinase catalytic domain signature | 378 | 391 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g05989 | 583 | Gene3D | - | 188 | 261 | - | - | |
Trre2g05989 | 583 | SMART | serkin_6 | 304 | 557 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05989 | 583 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 421 | 433 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g05989 | 583 | CDD | STKc_MAP3K-like | 310 | 553 | - | - | |
Trre2g05989 | 583 | Gene3D | Transferase(Phosphotransferase) domain 1 | 383 | 571 | - | - | |
Trre2g05989 | 583 | MobiDBLite | consensus disorder prediction | 15 | 30 | - | - | |
Trre2g05989 | 583 | FunFam | serine/threonine-protein kinase HT1 | 383 | 572 | - | - | |
Trre2g05989 | 583 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Trre2g05989 | 583 | SUPERFAMILY | Protein kinase-like (PK-like) | 290 | 553 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05989 | Trre-Chr2 | 65076902 | 65084301 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g05989 | 2 | 582 | MAP Kinase Kinase Kinase | AT4G35780 | 64.103 | 0.0 | 739 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Trre2g05989 | PK_Tyr_Ser-Thr | 2.4e-71 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05989 | - | - | gmx:100805180 | 956.051 |