Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05927 ATGGAGCTTTCTGCATTCCCTACTTTCAAACCGCTTTCCAATTCCCTTCCTTATCAATTTCCCTGTCGATGCTCTCTTTCTCTTCGTCACTGCGACTATGCCTTTCGTCGGAATCGCAATTCAAAACCGTTTCTACAGATCAGAATGTGCACGGAGAAAGTTCCGTCCAACGGTTACGGCGGAATTGATGTTGGAGAAACTAAATCCGATTTCGTCGAAGTCATTGCCATTGGCGGTAGAAAGGATGCGGTTCTTGATTTCTGCTTAAACTCGCCGTTTCAGTTGTCTTCTCTGCGATTTTGGAATGTCATTGTGAAAGATTCACAAGAGGTGCAATTACAGCAAAGGTCTACTAAAGAAGAACCTTACCCAGGAATTGTCGAACCTCCAGTATTTATGAAGTCATGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGACCAGACCACACTGTCGTTGTTGATATTTTTGAAACTGTAAGGTCCACAAATGGACTCACAGTTGCTGTGGTTTTGAAGCCTTTTAGCTTTGAAGGGATAAGACGAATTGATGAGATAAAAGCTTTGATGGGGAAGCTTAAGGAGAATACTAATTTACTTATCGAAATTGATATTGATGCACTTCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTATGAAGACTGCAAATGATGCTGTTTTGCTAGCTATTAAGGCCATATCTGTTCTAAAATCCGAAATGCACAAAAAATTTATAGATACATTGAACAGTAGCATGAAAGAAACATGCAATTCAGAAATTATTAAAATATTGGAATGCTATAAAGAAGCCAGAATTGGATTTGGGGCTGCTTATAATATCAAAACTTCAATATTGCAGTCTATATTTGATTGTCCTTTCCTGGGTGTTTCTTTGAAGGATCCAAATAGTGTAGTTATATGCATTGTTGCGTGCTCTGAACCCATCAATGATAGCGATGTAGCAGTATTTTTGCGTACTTTCCGTGAAACAACTGAATACACGAGGGATATTATAATATCAACAGTAATTGAGCCTGATGTAGAGCCCAACCTACTGATCACGACTGTCCTTACACTTGGCTTAACCGCGCAACAACCTTCCCAGAATGGTGGTATACTATCCAAACTTGCCCTGCATTTTCCTCGTGTTTTTAGTTTTTGGGGAAGACAAAGTCAGCAACAAATTGTCTCTGGGAAAGAGGATGCAGTATCTTCTCATGAAATGATAAGATCTTATGACAGTGATGAGGGGGAAAATAGGATTACTCCCAGTATTGTTGATCAAAGATTTGACAAGGACTATACACAATTGGAGCCAGACGTGAGCAACAACAGCTCAAAGTTGTCTGCTTCAAGGGATTCTGAAATAAATGAAGATTTATTTGACACCATAGCCAATTGTCCTATCCCTTATGAATCCATTAATGAAGAAGGCGACTCTGCTTTTCAGAGGGAGCAGCTTGGAAAATGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAGTGGGCCCAAGAAAGGGAAGCTGATGCTACACCAATGGTTGATAACCTAAGCATATTCCATCTTCCTGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACTGTCACGGTGTTCTGTCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAACAAAGTGGAGTCCTGTTGTGGAAATACAATATAGGGGAGGAAGATACAAGGGGCGGTGCCAAGGTGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTCAAGATGGAAATATCTATGACGGATTATGGCACAGTGGCAAGAAATCAGGTCCAGGAACATTCTATTTCAAGAACGGAGATATGTTTCAAGGATCGTGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAATCTGGTGATGCCTTTTTTGGCAATTTCAAAGACGGATGGCGGCATGGGCAGTTTTTTTGTGTGAATGCAAATGGAACGAGGTACACTGAAACTTGGGAACACGGTGTTCTTTTAGACAGCAAGTGTTTAGAATCGATAGATGACTGA 2127 0.418 MELSAFPTFKPLSNSLPYQFPCRCSLSLRHCDYAFRRNRNSKPFLQIRMCTEKVPSNGYGGIDVGETKSDFVEVIAIGGRKDAVLDFCLNSPFQLSSLRFWNVIVKDSQEVQLQQRSTKEEPYPGIVEPPVFMKSCSKTIVLVASAGYGPDHTVVVDIFETVRSTNGLTVAVVLKPFSFEGIRRIDEIKALMGKLKENTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEMHKKFIDTLNSSMKETCNSEIIKILECYKEARIGFGAAYNIKTSILQSIFDCPFLGVSLKDPNSVVICIVACSEPINDSDVAVFLRTFRETTEYTRDIIISTVIEPDVEPNLLITTVLTLGLTAQQPSQNGGILSKLALHFPRVFSFWGRQSQQQIVSGKEDAVSSHEMIRSYDSDEGENRITPSIVDQRFDKDYTQLEPDVSNNSSKLSASRDSEINEDLFDTIANCPIPYESINEEGDSAFQREQLGKWNLGPGFEVAKEWAQEREADATPMVDNLSIFHLPVGVRPSEELKDCHGVLSVRAASMLEAERDLSTKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLQDGNIYDGLWHSGKKSGPGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFFCVNANGTRYTETWEHGVLLDSKCLESIDD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05927 708 SUPERFAMILY Tubulin nucleotide-binding domain-like 74 238 IPR036525 -
Trre2g05927 708 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 96 695 - -
Trre2g05927 708 Gene3D - 571 629 - -
Trre2g05927 708 Pfam MORN repeat 619 641 IPR003409 -
Trre2g05927 708 Pfam MORN repeat 596 618 IPR003409 -
Trre2g05927 708 Pfam MORN repeat 666 677 IPR003409 -
Trre2g05927 708 Pfam MORN repeat 578 594 IPR003409 -
Trre2g05927 708 Gene3D Tubulin/FtsZ, GTPase domain 117 363 IPR036525 -
Trre2g05927 708 Gene3D - 644 705 - -
Trre2g05927 708 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 570 696 - -
Trre2g05927 708 SMART morn 663 684 IPR003409 -
Trre2g05927 708 SMART morn 594 615 IPR003409 -
Trre2g05927 708 SMART morn 617 638 IPR003409 -
Trre2g05927 708 SMART morn 571 592 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05927 Trre-Chr2 64685796 64692957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05927 64 707 PP2C-type Phosphatase Gene Family AT1G75010 46.599 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05927 - - gsj:114371951 946.421