Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05926 ATGGAGCTTTCTGCATTCCCTACTTTCAAACCGCTTTCCAATTCCCTTCCTTATCAATTTCCCTGTCGATGCTCTCTTTCTCTTCGTCACTGCGACTATGCCTTTCGTCGGAATCGCAATTCAAAACCGTTTCTACAGATCAGAATGTGCACGGAGAAAGTTCCGTCCAACGGTTACGGCGGAATTGATGTTGGAGAAACTAAATCCGATTTCGTCGAAGTCATTGCCATTGGCGGTAGAAAGGATGCGGTTCTTGATTTCTGCTTAAACTCGCCGTTTCAGTTGTCTTCTCTGCGATTTTGGAATGTCATTGTGAAAGATTCACAAGAGGTGCAATTACAGCAAAGGTCTACTAAAGAAGAACCTTACCCAGGAATTGTCGAACCTCCAGTATTTATGAAGTCATGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGACCAGACCACACTGTCGTTGTTGATATTTTTGAAACTGTAAGGTCCACAAATGGACTCACAGTTGCTGTGGTTTTGAAGCCTTTTAGCTTTGAAGGGATAAGACGAATTGATGAGATAAAAGCTTTGATGGGGAAGCTTAAGGAGAATACTAATTTACTTATCGAAATTGATATTGATGCACTTCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTATGAAGACTGCAAATGATGCTGTTTTGCTAGCTATTAAGGCCATATCTGTTCTAAAATCCGAAATGCACAAAAAATTTATAGATACATTGAACAGTAGCATGAAAGAAACATGCAATTCAGAAATTATTAAAATATTGGAATGCTATAAAGAAGCCAGAATTGGATTTGGGGCTGCTTATAATATCAAAACTTCAATATTGCAGTCTATATTTGATTGTCCTTTCCTGGGTGTTTCTTTGAAGGATCCAAATAGTGTAGTTATATGCATTGTTGCGTGCTCTGAACCCATCAATGATAGCGATGTAGCAGTATTTTTGCGTACTTTCCGTGAAACAACTGAATACACGAGGGATATTATAATATCAACAGTAATTGAGCCTGATGTAGAGCCCAACCTACTGATCACGACTGTCCTTACACTTGGCTTAACCGCGCAACAACCTTCCCAGAATGGTGGTATACTATCCAAACTTGCCCTGCATTTTCCTCGTGTTTTTAGTTTTTGGGGAAGACAAAGTCAGCAACAAATTGTCTCTGGGAAAGAGGATGCAGTATCTTCTCATGAAATGATAAGATCTTATGACAGTGATGAGGGGGAAAATAGGATTACTCCCAGTATTGTTGATCAAAGATTTGACAAGGACTATACACAATTGGAGCCAGACGTGAGCAACAACAGCTCAAAGTTGTCTGCTTCAAGGGATTCTGAAATAAATGAAGATTTATTTGACACCATAGCCAATTGTCCTATCCCTTATGAATCCATTAATGAAGAAGGCGACTCTGCTTTTCAGAGGGAGCAGCTTGGAAAATGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAGTGGGCCCAAGAAAGGGAAGCTGATGCTACACCAATGGTTGATAACCTAAGCATATTCCATCTTCCTGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACTGTGTAGAAATCACATTTAGGTCAAAAAAGCATGAGCCGGATGCAGGTAAGCACGGTGTTCTGTCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAACAAAGTGGAGTCCTGTTGTGGAAATACAATATAGGGGAGGAAGATACAAGGGGCGGTGCCAAGGTGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTCAAGATGGAAATATCTATGACGGATTATGGCACAGTGGCAAGAAATCAGGTCCAGGAACATTCTATTTCAAGAACGGAGATATGTTTCAAGGATCGTGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAATCTGGTGATGCCTTTTTTGGCAATTTCAAAGACGGATGGCGGCATGGGCAGTTTTTTTGTGTGAATGCAAATGGAACGAGGTACACTGAAACTTGGGAACACGGTGTTCTTTTAGACAGCAAGTGTTTAGAATCGATAGATGACTGA 2175 0.4179 MELSAFPTFKPLSNSLPYQFPCRCSLSLRHCDYAFRRNRNSKPFLQIRMCTEKVPSNGYGGIDVGETKSDFVEVIAIGGRKDAVLDFCLNSPFQLSSLRFWNVIVKDSQEVQLQQRSTKEEPYPGIVEPPVFMKSCSKTIVLVASAGYGPDHTVVVDIFETVRSTNGLTVAVVLKPFSFEGIRRIDEIKALMGKLKENTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEMHKKFIDTLNSSMKETCNSEIIKILECYKEARIGFGAAYNIKTSILQSIFDCPFLGVSLKDPNSVVICIVACSEPINDSDVAVFLRTFRETTEYTRDIIISTVIEPDVEPNLLITTVLTLGLTAQQPSQNGGILSKLALHFPRVFSFWGRQSQQQIVSGKEDAVSSHEMIRSYDSDEGENRITPSIVDQRFDKDYTQLEPDVSNNSSKLSASRDSEINEDLFDTIANCPIPYESINEEGDSAFQREQLGKWNLGPGFEVAKEWAQEREADATPMVDNLSIFHLPVGVRPSEELKDCVEITFRSKKHEPDAGKHGVLSVRAASMLEAERDLSTKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLQDGNIYDGLWHSGKKSGPGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFFCVNANGTRYTETWEHGVLLDSKCLESIDD 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05926 724 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 586 712 - -
Trre2g05926 724 Gene3D Tubulin/FtsZ, GTPase domain 117 363 IPR036525 -
Trre2g05926 724 Pfam MORN repeat 612 634 IPR003409 -
Trre2g05926 724 Pfam MORN repeat 635 657 IPR003409 -
Trre2g05926 724 Pfam MORN repeat 594 610 IPR003409 -
Trre2g05926 724 Pfam MORN repeat 682 693 IPR003409 -
Trre2g05926 724 SUPERFAMILY Tubulin nucleotide-binding domain-like 74 238 IPR036525 -
Trre2g05926 724 SMART morn 679 700 IPR003409 -
Trre2g05926 724 SMART morn 610 631 IPR003409 -
Trre2g05926 724 SMART morn 587 608 IPR003409 -
Trre2g05926 724 SMART morn 633 654 IPR003409 -
Trre2g05926 724 Gene3D - 660 721 - -
Trre2g05926 724 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 96 711 - -
Trre2g05926 724 Gene3D - 587 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05926 Trre-Chr2 64685796 64692957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05926 64 723 PP2C-type Phosphatase Gene Family AT1G75010 47.110 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05926 - - gsj:114371951 1031.17