Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05873 ATGGGAAAGAAAAATTTGAAACTACCTTCTCTTTTCAAAACCAAAGAATCACATCCAACAAAACAACATCCATGGAAATTCTTGCCATCTTGTAATCATCCAAAAACTGTTTCTTTTCGAACTGGTGTTGATGATGACATATTCAAAACAGTTAATTCTGTTTTTTTTGACCAAGCAGAGAACAACATTATTGAAACACCAAAGTCATGGTTCACAACATCATCAGAATCTGCAAGTATGTCAACAGAATCAGAAGAATATTGTTTCTACAACGACGGTGAATCGTTAGAGACATTGGTTGCCGGAGTTAAGTCAGAGAGGTCATCGGAGAGACTGTTTTTCGAAGCAGAAGACACGAGTTCGATTTTGGAAAAGGCGAAAGCGGATAGTTTTCCGTTTAAAGAAAGTGTTGTGTTAGCTATGGAGTCAGATGATCCATATGAAGATTTTAAGAGATCAATGGAAGAAATGGTTGAATCACATGGTGTGAAAGATTGGGAAGGTTTAGAAGAACTTTTGAGTTGGTATTTAAGAGTTAATGGTAAAAATAATCATGGTTTTATTATTGGTGCTTTTGTTGATTTGTTGATTAGTTTAGCAGGTTCTAATAATAATGATTCTAATTCTGATTTAACTCTATATTCTTCTGCTGTTTCTTCTTTTAGTTCTTCACCTTTGTACCTATGTGAGGGACAGAATGAGATTACTGAGATTGTTGAAGATAATAATGTAACATCTTCTTAG 744 0.3427 MGKKNLKLPSLFKTKESHPTKQHPWKFLPSCNHPKTVSFRTGVDDDIFKTVNSVFFDQAENNIIETPKSWFTTSSESASMSTESEEYCFYNDGESLETLVAGVKSERSSERLFFEAEDTSSILEKAKADSFPFKESVVLAMESDDPYEDFKRSMEEMVESHGVKDWEGLEELLSWYLRVNGKNNHGFIIGAFVDLLISLAGSNNNDSNSDLTLYSSAVSSFSSSPLYLCEGQNEITEIVEDNNVTSS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05873 247 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 23 199 IPR038933 GO:0045892
Trre2g05873 247 MobiDBLite consensus disorder prediction 1 23 - -
Trre2g05873 247 ProSiteProfiles OVATE domain profile. 139 198 IPR006458 -
Trre2g05873 247 Pfam Transcriptional repressor, ovate 143 199 IPR006458 -
Trre2g05873 247 NCBIfam uncharacterized plant-specific domain TIGR01568 137 200 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05873 Trre-Chr2 64361764 64362507 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre2g05873 Ovate 7.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05873 - - mtr:25485550 371.703