Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05868 ATGGCAGTAGGTAGTTCAATTGGTGTTCATGGTTGGGGAGACATGAAGAGTCTCACCGTCCAGTTCGTCACTGGACGGTGGTTCGTCGTGTTTGCCTCCTTTCTAATCATGGCAGCCGCCGGAGCCACCTACATGTTCGGCTTATACTCCCCCGTAATAAAATCGGAACTTGGTTATGACCAAAGCACACTAAACCTCCTTAGTTTTTTCAAAGATTTTGGTAGTAACGTTGGTGTCCTTTCAGGACTAATCAATGAACTCTATCCACCTTGGGTAGTTTTAACAATAGGTGCTATTCTAAATTTCTTTGGTTATTTCATGATTTGGTTATCAGTTACCAAAAAAATAGCAAAACCAAAAGTTTGGCAAATGTGTCTTTACATTTGTATAGGTGCTAATTCACAATCTTTTGCAAACACTGGTTCACTTGTTACTTGTGTTAAGAATTTCCCCGAATCTCGCGGCGCGGTTTTGGGAATTCTTAAAGGCTATGTTGGTCTTAGTGGTGCAATTATCACACAACTTTATTCTGCTATTTATTATGATGATACAAAGGCTTTGATTTTGTTTATAGGTTGGCTTCCTGCTGCTATTTCTTTTGCTTTTCTTCGAACCATTCGATATATGAAACCTGTTCGACAAGTTAACGAACTTAAGGTTTTTTATAATTTCTTGTATATTTCACTTGGTCTTGCTGGTTTTTTGTTGGTTATGATCATAATTCAAAAGAAGGCTAGTTTCTCACAGAGTGAATTTGGTGTAAGTGCTGCTGTGGTAATTTTCTGTCTTTTTCTTCCACTTATTGTTGTTTTCTTTGAAGAGAACAAGATTTGGCAGAGTAAGAAACTTGCTTTGGTTGATCCTTCACCAGTGAAAATAGTAACACAAAGTGAAACTGTTACTGAAACTGAAAATCACAAAGAAAAAGTCAACTCTGTAGTTTCAATTTCACCTCCAAAAAAAGATACAAAATGGCATGAAGATGTGTTTAATCCACCAGCAAGAGGTGATGATTATACAATACTACAAGCACTTTTCAGCATAGACATGTTGATACTATTTGTAGCATGTATTTGTGGTGTTGGTGGAACATTAACAGCAATTGATAATCTTGGTCAAATAGGAACATCACTAAGATATCCAAAGAAAAGCATAAGCACTTTTGTGTCATTAGTAAGTATTTGGAATTATCTAGGACGTGTTTTCTCAGGATTTGTTTCAGAACATTTTCTAACAAAATACAGATTTCCTCGTCCTCTTATGCTTACTTTAACACTCTTTGTCTCTTGTATTGGACATCTTTTGATAGCATTTGATGTTCCAAATGGTCTCTACATAGCTTCAGTGATTATCGGCTTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCTATAATTTCAGAACTTTTTGGACTTAAATATTATGCAACTTTGTATAATTTTGGAAGTGTTGCAAGTCCACTTGGGTTATATGTCCTTAATGTAAGGATCACTGGTCATTTGTATGACAAAGAAGGTACAAAACAATTAGAAGCACTTGGATTAAAGAGACAAGAAGGACAACAATTGAATTGTGTTGGTGTTGATTGTTTCAAGTTATCTTTCATTATTATTACAGCTGCTACATTTTTTGGTGCTGTTTTTTCACTTCTTTTAGTGGCTAGAACAAGAAAGTTTTACAAAAGTGACATATACAAGAGATTTAGAGAAGAAGCTATGGTGACAGAAGCTGAAATGGTGGAGAAAAAGACAGAAGAAGATGCCAAAGTTGGTCAGCAACATGTGGTGACAACTTAA 1797 0.3584 MAVGSSIGVHGWGDMKSLTVQFVTGRWFVVFASFLIMAAAGATYMFGLYSPVIKSELGYDQSTLNLLSFFKDFGSNVGVLSGLINELYPPWVVLTIGAILNFFGYFMIWLSVTKKIAKPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISFAFLRTIRYMKPVRQVNELKVFYNFLYISLGLAGFLLVMIIIQKKASFSQSEFGVSAAVVIFCLFLPLIVVFFEENKIWQSKKLALVDPSPVKIVTQSETVTETENHKEKVNSVVSISPPKKDTKWHEDVFNPPARGDDYTILQALFSIDMLILFVACICGVGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTLTLFVSCIGHLLIAFDVPNGLYIASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVRITGHLYDKEGTKQLEALGLKRQEGQQLNCVGVDCFKLSFIIITAATFFGAVFSLLLVARTRKFYKSDIYKRFREEAMVTEAEMVEKKTEEDAKVGQQHVVTT 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05868 598 FunFam Nodulin family protein 341 562 - -
Trre2g05868 598 SUPERFAMILY MFS general substrate transporter 25 559 IPR036259 -
Trre2g05868 598 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 565 - -
Trre2g05868 598 Gene3D MFS general substrate transporter like domains 21 217 IPR036259 -
Trre2g05868 598 Gene3D MFS general substrate transporter like domains 341 562 IPR036259 -
Trre2g05868 598 CDD MFS_Mch1p_like 25 546 - -
Trre2g05868 598 Pfam Nodulin-like 26 271 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05868 Trre-Chr2 64299855 64301651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05868 13 571 Nodulin-like Gene Family AT2G39210 72.093 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05868 - - pvu:PHAVU_007G024800g 966.452