Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05853 ATGCTTTTAAGTGAAAAGCACCAAATAGGTGATAATTTTGAATGCAATTTTTTGAATATATCACATGATACCGGCTCAAGTGCTTCAAAATTGGATGTTGCACTATCAATCCTTCAGGGGTATTTTGGACAACCTAATATCAATCACGGAGATCGAAATATTGATTTGATCAGAAGCATTGTATTTAGCCAGTGGTCGAACTCTCATTATTATAATTACGATGGATTTTTCACCGTAACTCTAGAGAAAGGGGATGAGATAATTAGTGTTGCAAATATCAGGGTGCATGAAAATCAAATTGCAGAGATGCCATACATTGCAACATGCGGTGCGTATACAAGCCAAGGAATGTGTCATCGACTATTTGACGCCATTGAATCAGCACTGAGCTATTTAAATGTTGAGATGTTGATTATTCCATCTTTAGATGAAGTAGCACGCTTTTGGGTTTCAAGTTTTCAATTTGAGCCCATTGATGAGGCCACAAAAATATTAATGAAAGAAAGAGTAGTGCCTTTTAACGATGTCACAATGTTGCAGAAGAAAATTCTTAAACACACCCTTTCTAGTGAAAATTTGAGTTTCATTGAGGTTTTCAATTTTGTGAAGAATCAAAAAGCAAATGAAATAAAACAAGTTGATCACAAGATTATTGCAAAGGGTCGTGGTGGAAACTCTTCTCGCCGCCGTGGTGGGCCACGAAAATCTACTTATAAATCGTAA 723 0.3624 MLLSEKHQIGDNFECNFLNISHDTGSSASKLDVALSILQGYFGQPNINHGDRNIDLIRSIVFSQWSNSHYYNYDGFFTVTLEKGDEIISVANIRVHENQIAEMPYIATCGAYTSQGMCHRLFDAIESALSYLNVEMLIIPSLDEVARFWVSSFQFEPIDEATKILMKERVVPFNDVTMLQKKILKHTLSSENLSFIEVFNFVKNQKANEIKQVDHKIIAKGRGGNSSRRRGGPRKSTYKS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05853 240 MobiDBLite consensus disorder prediction 221 240 - -
Trre2g05853 240 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 69 162 IPR016181 -
Trre2g05853 240 PANTHER PHD FINGER PROTEIN 12 2 211 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05853 Trre-Chr2 64190850 64192004 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05853 29 184 PHD Transcription Factor Family AT1G05380 43.949 2.46e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05853 - - psat:127129048 178.333