Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05850 ATGCTTTTAAGTGAAAAGCATCAAATAGGTGATAATTTTGAATGCAATTTTTTGAATATATCACATGATACCGGCTCAAGTGCTTCAAAATTGGATGTTGCACTATCAATCCTTCAGGGGTATTTTGGACAATCTAATATCAATCACGGAGATCAAAATATTGATTTGATCAGAAGCATTGTATTTAGCCAGTCGAACTCTCATTATTATAATTACGATGGATTTTTCACCGTAACTCTAGAGAAAGGGGATGAGATAATTAGTGTTGCAAATATCAGGGTGCATGAAAATCAAATTGCAGAGATGCCATACATTGCAACATGCGGTGCGTATACAAGCCAAGGAATGTGTCATCGACTATTTGACGCCATTGAATCAGCACTGAGCTATTTAAATGTTGAGATGTTGATTATTCCATCTTTAGATGAAGTAGCACGCTTTTGGGTTTCAAGTTTTCAATTTGAGCCCATTGATGAGGCCACAAAAATATTAATGAAAGAAAGAGTAGTGCCTTTTAACGATGTCACAATGTTGCAGAAGAAAATTCTTAAACACACCCTTTCTAGTGAAAATTTGAGTTTCATTGAGGTTTTCAATTTTGTGAAGAATCAAAAAGCAAATGAAATAAAACAAGTTGATCACAAGATTATTGCAAAGGGTCGTGGTGGAAACTCTTCTCGCCGCCGTGGTGGGCCACGAAAATCTACTTATAAATCGTAA 720 0.3569 MLLSEKHQIGDNFECNFLNISHDTGSSASKLDVALSILQGYFGQSNINHGDQNIDLIRSIVFSQSNSHYYNYDGFFTVTLEKGDEIISVANIRVHENQIAEMPYIATCGAYTSQGMCHRLFDAIESALSYLNVEMLIIPSLDEVARFWVSSFQFEPIDEATKILMKERVVPFNDVTMLQKKILKHTLSSENLSFIEVFNFVKNQKANEIKQVDHKIIAKGRGGNSSRRRGGPRKSTYKS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05850 239 PANTHER PHD FINGER PROTEIN 12 2 210 IPR042163 GO:0003714|GO:0045892
Trre2g05850 239 MobiDBLite consensus disorder prediction 220 239 - -
Trre2g05850 239 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 70 161 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05850 Trre-Chr2 64171473 64172627 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05850 29 183 PHD Transcription Factor Family AT1G05380 43.949 4.74e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05850 - - psat:127129048 169.859