Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05812 ATGAAATGGAATAATCCATTTGTGCCGGATGCATATGGAAAAACATTTGCAAAGAGGGGTGTTTATCTCATATCATTTTTATTTTTTCACTTCTTTCTGTCTCTCTCTGTCGGTACCATCATCATGAGACCACAAGGAAATCCATTAGATCTTAACAATTTGCCTGATGATTACTCTAGAGATCATGGTAAACAAGTTCTTGAAGACACTGATCCACCCGGTTGCATCAGGAAAAAGAAAAACGGCGGGAAGGATGGAAAAGAAGAGTGTGGGAAGGTGTGTGAATGTAGATTTTGTTCCCTTAAGTTCTGTAAATCTCAGGCTCTTGGGGGACACATGAACCGTCACCGCCAAGAGAGGGAAACTGAGACGCTTAACCATGCTCGTCAGCTAGTCTTCCGTAACGATCATAACCAGCTTGCACCACAACCACCTCCCTCTCACCTTGTAGGATGTTGTCCACCACCACCAATAGCATCAGCAGGCTACATTCAAGCAAATAACATGGGAGATCCAACAATGCCTTTAAGATTCCCAAGATATTTCTCAGGCTCATCTTCCTCAACTCATATTCCTCCTCCACCACCGCCGCCACCACAACCAACTCAACCATATCTCTACACTTCACCTTCGCGACCGGTGTCTTTCCCTACACATATAATTCCTCAGCATCCGATGAACGAATACCATGTCGGTCACGTGATGAGTAGCAACCACCACCAGCAATATGGAGGACTCCAACACATGAACTATGTTGGTGGAGCTGGTGGTGGTGAGTCAAATTACACGTGCATAGGTGCACCGGTTGGACAAGGTTTTGTTCCGGGAAGTGGTGGCGCCGAGAAAGGTCAAAATCATCATCATCAACAACATCAGGATCAAGATGGAACTTTGAATTGGGGAAGGAGTACCTACTCAGGAACACAGCATCGTTTGGATACTCATAATAATTCATCGATCAATCGGTTTCAAGATGGCTTCTAA 984 0.4482 MKWNNPFVPDAYGKTFAKRGVYLISFLFFHFFLSLSVGTIIMRPQGNPLDLNNLPDDYSRDHGKQVLEDTDPPGCIRKKKNGGKDGKEECGKVCECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRNDHNQLAPQPPPSHLVGCCPPPPIASAGYIQANNMGDPTMPLRFPRYFSGSSSSTHIPPPPPPPPQPTQPYLYTSPSRPVSFPTHIIPQHPMNEYHVGHVMSSNHHQQYGGLQHMNYVGGAGGGESNYTCIGAPVGQGFVPGSGGAEKGQNHHHQQHQDQDGTLNWGRSTYSGTQHRLDTHNNSSINRFQDGF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05812 327 FunFam Zinc finger protein STAMENLESS 1 71 141 - -
Trre2g05812 327 MobiDBLite consensus disorder prediction 179 203 - -
Trre2g05812 327 ProSitePatterns Zinc finger C2H2 type domain signature. 94 116 IPR013087 -
Trre2g05812 327 MobiDBLite consensus disorder prediction 189 203 - -
Trre2g05812 327 MobiDBLite consensus disorder prediction 275 327 - -
Trre2g05812 327 MobiDBLite consensus disorder prediction 294 327 - -
Trre2g05812 327 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Trre2g05812 327 PANTHER ZINC FINGER PROTEIN JAGGED 73 313 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05812 Trre-Chr2 63778301 63781584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05812 45 272 C2H2 Transcription Factor Family AT1G13400 41.026 1.62e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05812 - - aprc:113871902 322.398