Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05809 ATGGAAATCTCCTCCTTACACCACCGATGGAAAGACAAAGTTATCGTCATAATGGGCGCTACCGGCTCTGGTAAATCACGTCTTTCCGTTGAACTAGCCACTCGTTTCCCCTACTCCGAAATAATCAACTCCGATAAAATCCAAGTCTACAAAGGACTCGATATCACCACCAACAAGATCCCCTTTCATCAACGCAACAACGTTCCTCATCATCTTCTCGGCGACGTTGACCCTTCTCACGGCGAGTTCTCACCTTCAGATTTTCGCCGCTACGCTGGAGATATTATCTCTGATATAACTTTACGGAGAAAGCTTCCCATTATCGTTGGTGGGTCTAACTCATTCATTCACGCTCTTCTTGTAGAACGATTTGACTCAGAGTTGAACGTGTTTGAAGACGAGTCATCAACAACATCATCATCGGAGATATCATCGGATTTAAGGTACAAATGTTGCTTTATTTGGATGGATATATCGTTTCCTGTGTTATCGGAATATTTACTGAAACGAGTCGACGATATGTTTGACTCGGGAATGGTGGACGAGTTAGCCGAGTTTTATGAACCGGATGCGGATAACCGAACCGGGTTAAGAAAAGCAATCGGTGTACCCGAGTTCGACCGGTTTTTTAAACAGTATCCACCACCGGTTGGACCCATTGAAAAAGAAGGTAATAATAATGATTCAATGCGGGAAGTTGCATACGAGGAAGCAGTGAAGGCGATTAAAGATAACACGTGTCAGCTAGCTAAGAGACAGATAGGGAAGATCTTACGGTTAAAACGAGCTGGGTGGGACCTACAAAGAATTGATGCCACGGAGGCGTTTAGGGCGGTGCTGACGTCAGAGTCTAACGGCGGAGGAGAAGGGTTTTCCGATGTATGGAAAAAGCAAGTGTTGGAACCAAGCATGAAGATTGTGAATCGTTTCTTGATGGAGTAG 942 0.448 MEISSLHHRWKDKVIVIMGATGSGKSRLSVELATRFPYSEIINSDKIQVYKGLDITTNKIPFHQRNNVPHHLLGDVDPSHGEFSPSDFRRYAGDIISDITLRRKLPIIVGGSNSFIHALLVERFDSELNVFEDESSTTSSSEISSDLRYKCCFIWMDISFPVLSEYLLKRVDDMFDSGMVDELAEFYEPDADNRTGLRKAIGVPEFDRFFKQYPPPVGPIEKEGNNNDSMREVAYEEAVKAIKDNTCQLAKRQIGKILRLKRAGWDLQRIDATEAFRAVLTSESNGGGEGFSDVWKKQVLEPSMKIVNRFLME 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05809 313 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 267 - -
Trre2g05809 313 Gene3D - 11 311 IPR027417 -
Trre2g05809 313 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 11 311 IPR039657 -
Trre2g05809 313 FunFam Adenylate isopentenyltransferase 160 267 - -
Trre2g05809 313 Pfam IPP transferase 48 124 - -
Trre2g05809 313 Pfam IPP transferase 128 254 - -
Trre2g05809 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 193 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05809 Trre-Chr2 63737557 63738498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05809 148 311 C2H2 Transcription Factor Family AT2G27760 33.516 4.89e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05809 K10760 - gmx:100813761 419.083