Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05784 ATGGCGTCAACACTCTCTCCCTACATTCTTCTTCTTTTGTTTTCCCATTTTGTCCTCATTGTTCATTCTTCCACAAACCCAGATTTACAACCTCTTCTATCTTTCAAAACATCTTCAGACCCATCCAATATGCTCACAACTTGGAAAACCGGAACTGACCCATGCACTTGGACCGGTGTTTCATGCGTCAAAAACCGAGTCACTCGACTCGTTCTCGAAAATCTTAACCTACAAGGTTCCATTGAACCATTAACTTCTTTAACTCAGCTCCGAGTTTTAAGCCTCAAAGGAAACCGGTTTTCCGGTTCACCTCCGAGTCTCTCCAGCTTCACTTCTCTTAAGCTTCTCTTCTTATCTAACAACCGTTTCTCCGGCGAGTTCCCATCGACGGTGACGTCACTTTTTCGTCTCTACCGTCTCGATCTGTCAAATAACAACTTCTCCGGCGAGATTCCGGTGACTGTCAAACGTTTAACCCACCTCCTCACTCTCCGTCTTAACGACAATAAGTTCTCCGGCCTCATTCCTGAACTTCACCTTCCTGGTTTACAAGACTTTAACGTCTCCGGTAACGTTCTCTCCGGTGAGATACCGGAATCATTATCGGGTTTCTCCGGTTCATCTTTCGGGCAAAACCCGTTTCTCTGTGGAGCTCCGTTGAAGAAATGTGAAGCCGAACCGAGCAAACCGGGTTCTGAAGGTGCAATTGCTTCACCATTGGTACCAAGTAGTAGAATTCCAACAGTTTCATCTTCACCAAGCACAATGCCAACAACAACACCAACAACAAACGTTAAAAGCCGTGAAAAAAGAGGTTCTAAAATGAGTCCTATGGTTTTGATAGCTATCATAGTTGGTGATGTTCTTGTCCTTGGAATAGTGTGTTTGCTTCTTTATTGCTATTTTTGGAGAAACTATTCTTCAAAATCAAAGAAAGAAAAAGGGTTGAAACTATTTGAGACTGAAAAGATAGTTTATTCTTCAAGTCCATACCCTACACAAGGAGGGTTTGAGAGGGGTAGAATGGTATTTTTTGAAGGAGAAAAGAGATTTGAACTTGAGGATTTGTTACGTGCTTCTGCTGAAATGCTTGGGAAAGGTGGATTTGGAACTGCTTATAAAGCTGTTCTTGATGATGGAAATGTTGTTGCTGTGAAGAGATTGAAAGATGCACAGATTGCAGGGAAGAGAGAATTTGAACAGCATATGGAAGTTCTTGGAAGGATTAGGCACCCAAATGTTGTTAGTTTAAGGGCTTATTATTTTGCAAGAGAAGAGAAGCTTTTAGTTTATGATTACATGCCTAATGCAACTTTGTTCTGGCTTCTTCATGGAAACAGAGGACCAGGAAGAACCCCACTGGATTGGACCACAAGGCTCAAGATAGCAGCTGGAGCTGCAAAAGGAGTAACTTTCATTCACAACTCGTGCAAATCCCTTAAACTCACTCATGGTAACATTAAATCCACCAACATACTCCTTGACAAGCAAGGAAATGCACGTGTATCGGATTTTGGGCTTTCCATTTTCACCGGTCCAAGCCCGTCAGGAGCTGGTAGCAGACCAAACGGCTACCGTGCTCCTGAGGTATTGGACGGTCGAAAACAATCCCAAAAATCTGACGTGTACTCTTTCGGTGTTCTCTTGCTAGAGATGCTTACAGGGAAGTGTCCGTCTGCTGGGGAGAGCGGTGGGAGTGGTTATGGTGGTGGGGTGATTGATCTACCTAGGTGGGTGCAATCAGTAGTTAGAGAGGAATGGACTGCTGAAGTTTTTGATTTGGAGTTGATGAGGTATAAGGATATTGAAGAGGAAATGGTCGGGTTGCTTCAGATTGCTATGTCTTGTACTGCTGCTTCACCTGATCAACGGCCAAGGATGTCACACGTTGTTAAAATGATTGAGGACTTGCGTGGGGTTGAGGTGTCTCCTTGTCATGACACCGCGGAATCTGTCTCTGATTCACCTTCATTGTCTGAAGATGCCTGTGCTGGTACTGCTAGTCAGTAA 2010 0.4393 MASTLSPYILLLLFSHFVLIVHSSTNPDLQPLLSFKTSSDPSNMLTTWKTGTDPCTWTGVSCVKNRVTRLVLENLNLQGSIEPLTSLTQLRVLSLKGNRFSGSPPSLSSFTSLKLLFLSNNRFSGEFPSTVTSLFRLYRLDLSNNNFSGEIPVTVKRLTHLLTLRLNDNKFSGLIPELHLPGLQDFNVSGNVLSGEIPESLSGFSGSSFGQNPFLCGAPLKKCEAEPSKPGSEGAIASPLVPSSRIPTVSSSPSTMPTTTPTTNVKSREKRGSKMSPMVLIAIIVGDVLVLGIVCLLLYCYFWRNYSSKSKKEKGLKLFETEKIVYSSSPYPTQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIAGKREFEQHMEVLGRIRHPNVVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAAKGVTFIHNSCKSLKLTHGNIKSTNILLDKQGNARVSDFGLSIFTGPSPSGAGSRPNGYRAPEVLDGRKQSQKSDVYSFGVLLLEMLTGKCPSAGESGGSGYGGGVIDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMSCTAASPDQRPRMSHVVKMIEDLRGVEVSPCHDTAESVSDSPSLSEDACAGTASQ 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05784 669 MobiDBLite consensus disorder prediction 645 669 - -
Trre2g05784 669 Pfam Protein kinase domain 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05784 669 CDD STKc_IRAK 364 637 - -
Trre2g05784 669 FunFam pollen receptor-like kinase 1 331 433 - -
Trre2g05784 669 MobiDBLite consensus disorder prediction 243 266 - -
Trre2g05784 669 MobiDBLite consensus disorder prediction 227 270 - -
Trre2g05784 669 Gene3D Ribonuclease Inhibitor 21 85 IPR032675 -
Trre2g05784 669 Gene3D Ribonuclease Inhibitor 86 230 IPR032675 -
Trre2g05784 669 MobiDBLite consensus disorder prediction 648 669 - -
Trre2g05784 669 SUPERFAMILY Protein kinase-like (PK-like) 362 634 IPR011009 -
Trre2g05784 669 ProSitePatterns Protein kinases ATP-binding region signature. 364 396 IPR017441 GO:0005524
Trre2g05784 669 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Trre2g05784 669 FunFam Nuclear pore complex protein NUP107 25 177 - -
Trre2g05784 669 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 434 644 - -
Trre2g05784 669 Gene3D Transferase(Phosphotransferase) domain 1 434 653 - -
Trre2g05784 669 ProSiteProfiles Protein kinase domain profile. 358 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05784 669 Gene3D Phosphorylase Kinase; domain 1 338 433 - -
Trre2g05784 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 639 IPR046959 -
Trre2g05784 669 SUPERFAMILY L domain-like 38 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05784 Trre-Chr2 63499145 63502452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05784 28 669 Receptor kinase-like Gene Family AT1G68400 65.805 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre2g05784 Pkinase 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05784 - - cam:105851082 1075.85