Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05781 ATGAAGCATGAAGTAACAGAGGGGTTTGGTTGTTTCCCTTACACTACAACACAACACCAAGACTGTGGCTTATTGCCAATACATAATTGTGATGATGATGACTCACAAAAGCCTAAAATTATCCAATTACAGAATAAAGGGAAATGGTTTGAGTTTGAGATTGAATCTGTAACTCCTCTTGAGTTTCAGGGTGGTAGTATTACTACTACTTCTACTTGTATTTTTAGAGACAATAATCTATACAAACTTCTTCAATCCAAAAGTTGTGAATCTTTCAATTATAATTATACTTTTCCTCCTACCTTTGGATTTGCTTCTTTTCGTATGAAAACTAACACAACCTTGTTCATGTGCAACCGTACCCTCCATATCAACCCTCCAACATATATGCATAACTACACAAAATGCCCTCTCTATGATCTCTACTACCAGCAGAGTTATATTGATGATGCGTCTCGGAGTGCTTTTACAGCTTGTGCAAATGTCTTGCTTCCGAATAAAGATTTCGCTAATGCTGACGACCCTTTTACTATCCTAACTTCTGATATCCCAACTGAAGTAAATATAACAGAAGAATGTGCATATTGTCACTTCAACCAAAGAGGGAAGTGTCAAATTGACAGCAATGACAGATTTAATTGTGCTGATTCTGACAGTTATGATAAAACTGGAAAGAATACACCGATTGCAGATAGAACCGGAAAGAAGATGCCCATAGCAGCAACAGCGGTCCTGGTGGTTGTTGGAGTTGCAGTACTGATGTGGTTGGCTTACTGCATTAGGAAAAAGATCTTTGCTCTAGCATTACTTTTGTTCAGGAAAGAAAATTTAACAAATCGTATCATTAAGGAGTATTTGAAAGAACACGGACATCTTCCAGCTGCTAGGTACAGTTATTCAGATGTCAAGAAAATAACAAATTCTTTCAGCAACAAATTAGATCAAGGAGGGTATGGAAGCGTATACAAAGGGAAGTTAAATAATGATCGCAGTGTTGCAGTGAAGGTTTTAAGTGAATCAAAAGGTAATGGTGAGGATTTCATTAATGAAGTTGCGAGTATCAGCAGAACATCACATGTCAACATTGTTAGACTTTTGGGGTTCTGTTTGGATGGTTCTAAAAAGGCGCTAATATACGAATTCATGCCTAATGGATCACTTGAAAAGTTCATATTTGAAGAGAAAAATCTAGTAAAGGATGATCGCCAATTGGATTGCAAAACATTGTATGATATTGCAGTTGGCGTTGCTCGTGGTTTAGAGTACTTGCACAAAGGATGCAACACTAGAATCTTACATTTTAACATAAAACCTCATAATATATTACTAGATGATGATTTTTGTCCAAAAATTTCAGATTTTGGACTTGCTAAAATATGTCCAAGAAAAGAAAGCATTGTATCCGTATTTGGTGCAAGGGGAACGCCAGGATATATTGCTCCGGAGTTATTCTCTAGAAATTTTGGTGCGGTGTCACATAAATCAGATGTCTATAGTTATGGAATGATGGTTTTAGAAATGGTTGGACGAAGAAAGAACATCAACGTTGAAGTTGATTGTTCTAGCGAGTTATATTTTCCACACTGGATTTACAAGCGTCTTGAATTGAATCAGGATCTTGGACTCAAGTGTATAAAAAATGAAATTGATGAAGAAATGATAAGAAAAATGACAGTGGTGAGTTTATGGTGCATACAAACCGACCCTTTGAATCGACCAGCAATGCCTAAAGTGGTGGAAATGTTGGAAGGGAGCCTTCAAGTGCTGGAAATACCATCAAAACCCTTTCTCTATTCTCCTTCAACATCTTCAACTCATTTATCATCTGAAAAATTGTGA 1839 0.367 MKHEVTEGFGCFPYTTTQHQDCGLLPIHNCDDDDSQKPKIIQLQNKGKWFEFEIESVTPLEFQGGSITTTSTCIFRDNNLYKLLQSKSCESFNYNYTFPPTFGFASFRMKTNTTLFMCNRTLHINPPTYMHNYTKCPLYDLYYQQSYIDDASRSAFTACANVLLPNKDFANADDPFTILTSDIPTEVNITEECAYCHFNQRGKCQIDSNDRFNCADSDSYDKTGKNTPIADRTGKKMPIAATAVLVVVGVAVLMWLAYCIRKKIFALALLLFRKENLTNRIIKEYLKEHGHLPAARYSYSDVKKITNSFSNKLDQGGYGSVYKGKLNNDRSVAVKVLSESKGNGEDFINEVASISRTSHVNIVRLLGFCLDGSKKALIYEFMPNGSLEKFIFEEKNLVKDDRQLDCKTLYDIAVGVARGLEYLHKGCNTRILHFNIKPHNILLDDDFCPKISDFGLAKICPRKESIVSVFGARGTPGYIAPELFSRNFGAVSHKSDVYSYGMMVLEMVGRRKNINVEVDCSSELYFPHWIYKRLELNQDLGLKCIKNEIDEEMIRKMTVVSLWCIQTDPLNRPAMPKVVEMLEGSLQVLEIPSKPFLYSPSTSSTHLSSEKL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05781 612 Gene3D Transferase(Phosphotransferase) domain 1 382 597 - -
Trre2g05781 612 SUPERFAMILY Protein kinase-like (PK-like) 290 583 IPR011009 -
Trre2g05781 612 FunFam PR5-like receptor kinase 382 594 - -
Trre2g05781 612 ProSiteProfiles Protein kinase domain profile. 307 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05781 612 Pfam Protein tyrosine and serine/threonine kinase 309 582 IPR001245 GO:0004672|GO:0006468
Trre2g05781 612 PANTHER RUST RESISTANCE KINASE LR10-RELATED 281 603 IPR045874 GO:0004672
Trre2g05781 612 Gene3D Phosphorylase Kinase; domain 1 282 381 - -
Trre2g05781 612 FunFam serine/threonine-protein kinase PBS1-like 277 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05781 Trre-Chr2 63485005 63487607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05781 182 609 Receptor kinase-like Gene Family AT5G38260 48.276 1.99e-124 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre2g05781 PK_Tyr_Ser-Thr 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05781 - - tpra:123901115 889.026