Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g05778 | ATGCTACTTAGTAATGGGTACCAAGGAGATTGTCCACCTTCATTTAGTTGTGGATTCCTTGGCAATATCAGTTTCCCTTACACTACAACACAACACCAAGACTGTGGCTTATTGCCAATACATAATTGTGATGATGATGACTCACAAAAGCCTAAAATTATCCAATTACAGAATAAAGGGAAATGGTTTGAGTTTGAGATTGAATCTGTAACTCCTCTTGAGTTTCAGGGTGGTAGTATTACTACTACTTCTACTTGTATTTTTAGAGACAATAATCTATACAAACTTCTTCAATCCAAAAGTTGTGAATCTTTCAATTATAATTATACTTTTCCTCCTACCTTTGGATTTGCTTCTTTTCGTATGAAAACTAACACAACCTTGTTCATGTGCAACCGTACCCTCCATATCAACCCTCCAACATATATGCATAACTACACAAAATGCCCTCTCTATGATCTCTACTACCAGCAGAGTTATATTGATGATGCGTCTCGGAGTGCTTTTACAGCTTGTGCAAATGTCTTGCTTCCGAATAAAGATTTCGCTAATGCTGACGACCCTTTTACTATCCTAACTTCTGATATCCCAACTGAAGTAAATATAACAGAAGAATGTGCATATTGTCACTTCAACCAAAGAGGGAAGTGTCAAATTGACAGCAATGACAGATTTAATTGTGCTGATTCTGACAGTTATGATAAAACTGGAAAGAATACACCGATTGCAGATAGAACCGGAAAGAAGATGCCCATAGCAGCAACAGCGGTCCTGGTGGTTGTTGGAGTTGCAGTACTGATGTGGTTGGCTTACTGCATTAGGAAAAAGATCTTTGCTCTAGCATTACTTTTGTTCAGGAAAGAAAATTTAACAAATCGTATCATTAAGGAGTATTTGAAAGAACACGGACATCTTCCAGCTGCTAGAGACAAGAATCTCTACAAAATGCTGCAAAACAGAAGTTGTGATGCTTTCAGATATAATTATACTCTTCCTCCCACCTCTCACTTTGTTTCTTTTCATATGGAATTTCATGCAACCTTGTTCATGTGCAACCGTACTCTCCATGTCAACCCTCCAGCATATATGCATAAGTATACAAAGTGTCCTCTTTCCGATCTCTACTACCAGCCTTACCACTATGATGAAAATGCATCTCAGAGTGCTTTTACAGCTTGTACAAATGTCCACCTTCCGGCTAAAGACTTTGCTGACTCTGACGATCCTTTTAGTTTCGTAACTGCTGATATCCCAATTCAAGTAAGCATAACAAAGGAATGCGCAAATTGTCACTACAACCTAAGTGGACGGTGCAAGCTTGACAGCAACGACAGGTTTTATTGTGCCGACAGTATACTAAATGATAGAAAAGGACTAAGTAAGAATGCCAAACTGGGTATAGCAGCCATGGTGGCTTTTGGAGTTGCAGTGTTGATGTCGTTGACTTACTGCATAAGGAGAACGATCTTCCCCGCGACGTTTCTTTTGTTCCGGAAGGAGAGTTCAGCCCATCAAATTATTGAGGAGTTTTTGAAGGAACATGGACCTCTTCCAGCTACTAGGTACAACTATTCTGATGTCACGAAAATAACAAACTCTTTCAAAAACAAATTAGGCCAGGGAGGATACGGAAGTGTATACAAAGGGAAGTTACATGATAAGCGTACTGTTGCAGTGAAGGTTTTAAGTGAATCAAAAGGCGATGGTGAAGATTTCATTAATGAAGTTGCGAGTATCAGTAGAACTTCACATGTCAATGTTGTTAGACTTTTGGGGTTCTGTTTGGATGTTTCTAAAAAGGCACTCATATATGAATACATGCCAAATGGATCTCTTGAGAAGCTCATATACGAAGAGAAAAACCCATTGAAGGATGACTTCCAATTGGATTGCAAAACATTGTACGATATTGCAGTTGGTGTTGCTCGTGGACTAGAGTACTTGCACAGAGGGTGCAACACTAGAATCTTGCATTTTGACATAAAACCTCATAATATATTACTTGATGAGGATTTCAGCCCAAAAATTTCAGATTTTGGACTTGCTAAAATATGTCCAAGTAAAGAAAGCACTGTATCCATATTTGGTGCAAGGGGAACACCGGGGTATATTGCTCCAGAGTTGTTCTCCAGACATTTTGGTGGGGTGTCACATAAATCAGATGTCTACAGTTATGGAATGATGGTTTTAGAAATGGTTGGTCGAAGAAAGAACATAAAAGTTGAAGTGGATTGTTCTAGCGAGTTATATTTTCCACATTGGATTTACAAACGTCTTGAATTGAATCAGGATCTTGGACTCAGGTGTATTAAAAATGAAATTGATGAAGAAATGGTAAGGAAAATGACAGTGGTGAGTTTATGGTGCATACAAACTGACCCTACGCATCGACCAGCAATGCATAAAGTAGTGGAAATGCTGGAAGGGAGTCTTCAAGTGCTGGAAATACCACCCAAGCCCTTTCTGTCTTCTCCTTCAACATCCTCAATCCACTTATCATCTGAAATATTATGA | 2514 | 0.3886 | MLLSNGYQGDCPPSFSCGFLGNISFPYTTTQHQDCGLLPIHNCDDDDSQKPKIIQLQNKGKWFEFEIESVTPLEFQGGSITTTSTCIFRDNNLYKLLQSKSCESFNYNYTFPPTFGFASFRMKTNTTLFMCNRTLHINPPTYMHNYTKCPLYDLYYQQSYIDDASRSAFTACANVLLPNKDFANADDPFTILTSDIPTEVNITEECAYCHFNQRGKCQIDSNDRFNCADSDSYDKTGKNTPIADRTGKKMPIAATAVLVVVGVAVLMWLAYCIRKKIFALALLLFRKENLTNRIIKEYLKEHGHLPAARDKNLYKMLQNRSCDAFRYNYTLPPTSHFVSFHMEFHATLFMCNRTLHVNPPAYMHKYTKCPLSDLYYQPYHYDENASQSAFTACTNVHLPAKDFADSDDPFSFVTADIPIQVSITKECANCHYNLSGRCKLDSNDRFYCADSILNDRKGLSKNAKLGIAAMVAFGVAVLMSLTYCIRRTIFPATFLLFRKESSAHQIIEEFLKEHGPLPATRYNYSDVTKITNSFKNKLGQGGYGSVYKGKLHDKRTVAVKVLSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDVSKKALIYEYMPNGSLEKLIYEEKNPLKDDFQLDCKTLYDIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDEDFSPKISDFGLAKICPSKESTVSIFGARGTPGYIAPELFSRHFGGVSHKSDVYSYGMMVLEMVGRRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLRCIKNEIDEEMVRKMTVVSLWCIQTDPTHRPAMHKVVEMLEGSLQVLEIPPKPFLSSPSTSSIHLSSEIL | 837 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g05778 | 837 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 504 | 826 | IPR045874 | GO:0004672 | |
Trre2g05778 | 837 | Gene3D | Transferase(Phosphotransferase) domain 1 | 607 | 815 | - | - | |
Trre2g05778 | 837 | SMART | serkin_6 | 532 | 814 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05778 | 837 | Pfam | Protein kinase domain | 535 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05778 | 837 | ProSitePatterns | Protein kinases ATP-binding region signature. | 538 | 560 | IPR017441 | GO:0005524 | |
Trre2g05778 | 837 | FunFam | serine/threonine-protein kinase PBS1-like | 500 | 606 | - | - | |
Trre2g05778 | 837 | SUPERFAMILY | Protein kinase-like (PK-like) | 516 | 808 | IPR011009 | - | |
Trre2g05778 | 837 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 656 | 668 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g05778 | 837 | FunFam | PR5-like receptor kinase | 607 | 819 | - | - | |
Trre2g05778 | 837 | ProSiteProfiles | Protein kinase domain profile. | 532 | 822 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g05778 | 837 | Gene3D | Phosphorylase Kinase; domain 1 | 509 | 606 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g05778 | Trre-Chr2 | 63462195 | 63466142 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g05778 | 421 | 834 | Receptor kinase-like Gene Family | AT1G66910 | 48.131 | 8.96e-120 | 375 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Trre2g05778 | Pkinase | 2.7e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g05778 | - | - | tpra:123901115 | 838.18 |