Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05775 ATGGCCTCTGGTGAAGGGAGGCGGCGTCATCATGATCTTGTGCCACTTGCTGCATTGCTTAAGAGAGAGATGAAGAGTGAGAAGATGGAGAAGCCTACTGTGAGAATTGGTCAAGCTGCTCAGTCTAAGAAAGGGGAGGATTATTTTCTAGTTAAGACCGATTGTCAGCGTGTTCCCGGGAACTCTTCAACAGCCTTTTCTGTATTTGCGATCTTTGATGGACACAACGGAAATGCTGCTGCCGTTTTTACTAAGGAAAATTTGTTAAATCATGTGCTGTGTGCTCTTCCTCGAGGGCTTGGGAGAGATGAGTGGCTGCAAGCTTTACCTAGGGCATTGGTTGCTGGATTTGTTAAGACTGATAAAGAATTTCAGAGCAGAGGAGAAACTTCTGGGACCACAGCCACGTTTGTGATAGTTGATCGGTGGACTGTGACAGTTGCATCTGTTGGAGATTCTCGTTGTATACTGGATACACAGGGTGGTGCTGTTACCACCTTAACAGTTGATCACAGACTAGAAGAGAATATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGTGAGGTTGGGAGGCTCAGCATTGTCGGTGGTGCTGAGATTGGCCCTCTTCGATGCTGGCCAGGAGGTCTATGCCTTTCAAGGTCGATAGGAGACATGGATGTTGGGGAGTTTATTGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAAAGCTGGTGGGAGGCTTATAATTGCTTCTGATGGCATATGGGATGCTGTATCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCAGCCGAACTTGCTGCTATGCAGGTTGTCAAGGAAGCACTAAGAACTAGAGGGTTAAAGGATGACACGACATGCATAGTAGTTGACATAATCCCACCTGATAACGAATTGCCACCAACACCTCCCCCCAAAAAGCGGAATAAGCTGAGAGATCTTTTTATGTTTAGGAAGAGGTCCCGTGATACCGCTGGCAAGCTGTCAAAGAAGCTTTCAGCTATAAATATAGTTGAAGAACTGTTTGAAGAAGGATCAGCCATGCTTGCTGAAAGATTAGGAAATGATGAGAACTCAGGACAATCGACATCTGGCCTTTTTGTCTGTGCTGTATGCCAAGTTGATCTTGCTCCAAGCGAGGGCATATCTGTCCATGCAGGTTCAATTTTCTCTACAAGCTCGAAGCCGTGGCAAGGTCCTTTTCTATGTTGTGATTGTCGCAATAAGAAGGATGCAATGGAAGGAAAACGTCCAAGTGGAGTTAAAGTGTCATAG 1290 0.4566 MASGEGRRRHHDLVPLAALLKREMKSEKMEKPTVRIGQAAQSKKGEDYFLVKTDCQRVPGNSSTAFSVFAIFDGHNGNAAAVFTKENLLNHVLCALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDAVSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPKKRNKLRDLFMFRKRSRDTAGKLSKKLSAINIVEELFEEGSAMLAERLGNDENSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCCDCRNKKDAMEGKRPSGVKVS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05775 429 Gene3D - 36 301 IPR036457 -
Trre2g05775 429 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Trre2g05775 429 PANTHER PROTEIN PHOSPHATASE 38 296 IPR015655 GO:0004722|GO:0006470
Trre2g05775 429 FunFam probable protein phosphatase 2C 5 35 302 - -
Trre2g05775 429 Pfam Protein phosphatase 2C 61 269 IPR001932 -
Trre2g05775 429 CDD PP2Cc 43 297 IPR001932 -
Trre2g05775 429 SMART PP2C_4 25 295 IPR001932 -
Trre2g05775 429 SMART PP2C_SIG_2 51 297 IPR001932 -
Trre2g05775 429 SUPERFAMILY PP2C-like 41 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05775 Trre-Chr2 63446618 63449447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05775 1 428 PP2C-type Phosphatase Gene Family AT1G68410 79.358 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05775 - - tpra:123901213 806.979