Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05772 ATGGCTTTGTTTCATGTAGTACATCATAGATTCCATTTGTTCTCTCATTATTTAACTGTGCTACTGTTACTTGTCTTAACTAGTAAAGGAAATGGACACAGATATGATTGTCCAGAATCATTTGATTGTGGATATCTTGGGTCTATTCGCTACCCTTTTACCACAGTTGGATTCCCAAACTGTGGTGCATTGGCAATTCAAGGTTGTGATGATACCAACAAAACTGCAATGAAGACCATCCAGTTAACCAATGGAGGAACACACTTTCAAGTTACAAACATTGTTAATGACTGGCGCAAGGGCAACACTATTTCCATTATTGACCAGAATTTTACCAACCTTTTGAAGAAAAACTCTTGTGAGGCTTTCAGCTATAGTATTACCCTCCCACCTTCATCTCCTTTTGGAATATTTTATATGAAAGACAATATAACTGCTGTCAAATGCAACCGTACCAAAAAAATAGTCGTCAACCCTCCAAATAATTTCTTCAAAAATAGTTCTTGTCGTCACTATGATTTTTACTTCGGCAATTCAATACCTGATGATGAGTTTAACCACTCTTTTGCGTCGTGCTCATCATTTCATCTTCCCGTCATTGGATTAGGCTTTGCACTTTCTGGTAACCCGTTTCAATATTTAGCTGATGAAATTACCTTTCAGTTCCAACATACAGATCAATGTACACAGTGTTACCGTAAAAGAAAAGGTCATTGTCGTATCGACAGCAACAAACGAGTTTATTGCGCTGCAAGGAAGGGTAGAAGTTTAATTCGGAAGCTAGGATTGATTTTAGGAGTCGGCGTTGGACCATGGATCATAGTTGGATTGTTTGTCGCGCTACGGTATTACAAACGAAAATATGGCCCTGCACACATCCAATTCCTACCAAGCAACAACACTTTTGTTGATCATCCAAATCATGAAATGGAGTCAAACAAGCTCTTCTTTGGGGTACCTGTCTTCTCCTATGAAGAGCTTCAGCAAGCAACAAACAATTTCGACCGCACTAGAAAGCTAGGAGATGGAGGTTTTGGTACTGTTTACTATGGAAAACTCAAAGATGGAAGGGAGGTTGCTGTGAAACACTTGTTTGAGCACAATTACAGGAGAGTAGAACAGTTTGTGAATGAAATCGAAATATTGGCTCGCTTGCGCCACAGGAATCTAATGTCCCTCTACGGTTGCACTTCACGTTACAGCCGCGAGTTACTGCTTGTATATGAATACATTCCAAATGGAACTGTTGCTAGCCATCTCCATGGTGATTTAGCTAGAGCTGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCAATAGAAACTGCTTCTGCATTGGCTTATCTACATGCTTCTGACATCATTCACCGTGATGTCAAAACCAACAACATTCTACTTGACACTAATTTTTCTGTTAAGGTAGCAGATTTTGGACTTTCGAGGTTGTTCCCCAATGATGCCAGCCATGTCTCGACAACTCCACAAGGAAGTCCAGGTTATCTAGATCCTGAATATTTCCAACTCTACAAGCTCTCAGTGAAGAGTGATGTGTATAGTTTTGGTGTTGTTCTTATTGAGCTAATATCATCTATGACAGCAATTGATGCTGCCAGAGAAGGAGAGGAAATTAACTTAGCAAATTTAGCAGCTAAGAAGATAAGAAACGACAAAGTTAGAGAGCTGGTTGACCCATCACTTGGTTTTGAATCAGACAGTGAAGTTAAAAGGATGGTAAATTCAGTGGCAGAATTGGCTTTTCAATGTGTGTTAGGAGACATGGAATTAAGACCTTATATGGACGAAGTTCTGCAAGAACTCAAGAAAATTGATGGTGGGAATTTTGAGTTTGATCATCTAGAAAAAGTACATCAGTATGCTGGCTCTTCGCGCTCTAAAGAAGTACATCTACCAATAGTTGGAACTTCTATCGATAAGAAGCAAGAATCATCCTCTTCACCAAAGTCATTGACTGAGAAATGGGAAAGTAAATCTAATACGCCTAGTTCCGGTGGTTAA 2016 0.3953 MALFHVVHHRFHLFSHYLTVLLLLVLTSKGNGHRYDCPESFDCGYLGSIRYPFTTVGFPNCGALAIQGCDDTNKTAMKTIQLTNGGTHFQVTNIVNDWRKGNTISIIDQNFTNLLKKNSCEAFSYSITLPPSSPFGIFYMKDNITAVKCNRTKKIVVNPPNNFFKNSSCRHYDFYFGNSIPDDEFNHSFASCSSFHLPVIGLGFALSGNPFQYLADEITFQFQHTDQCTQCYRKRKGHCRIDSNKRVYCAARKGRSLIRKLGLILGVGVGPWIIVGLFVALRYYKRKYGPAHIQFLPSNNTFVDHPNHEMESNKLFFGVPVFSYEELQQATNNFDRTRKLGDGGFGTVYYGKLKDGREVAVKHLFEHNYRRVEQFVNEIEILARLRHRNLMSLYGCTSRYSRELLLVYEYIPNGTVASHLHGDLARAGLLTWPIRMQIAIETASALAYLHASDIIHRDVKTNNILLDTNFSVKVADFGLSRLFPNDASHVSTTPQGSPGYLDPEYFQLYKLSVKSDVYSFGVVLIELISSMTAIDAAREGEEINLANLAAKKIRNDKVRELVDPSLGFESDSEVKRMVNSVAELAFQCVLGDMELRPYMDEVLQELKKIDGGNFEFDHLEKVHQYAGSSRSKEVHLPIVGTSIDKKQESSSSPKSLTEKWESKSNTPSSGG 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05772 671 MobiDBLite consensus disorder prediction 643 671 - -
Trre2g05772 671 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Trre2g05772 671 Pfam Protein tyrosine and serine/threonine kinase 337 606 IPR001245 GO:0004672|GO:0006468
Trre2g05772 671 SUPERFAMILY Protein kinase-like (PK-like) 311 606 IPR011009 -
Trre2g05772 671 Gene3D Phosphorylase Kinase; domain 1 304 410 - -
Trre2g05772 671 FunFam Wall-associated receptor kinase-like 20 411 618 - -
Trre2g05772 671 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 665 IPR044652 GO:0004672
Trre2g05772 671 ProSiteProfiles Protein kinase domain profile. 334 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05772 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Trre2g05772 671 Gene3D Transferase(Phosphotransferase) domain 1 411 614 - -
Trre2g05772 671 SMART serkin_6 334 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05772 671 MobiDBLite consensus disorder prediction 636 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05772 Trre-Chr2 63427904 63430579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05772 39 671 Receptor kinase-like Gene Family AT1G25390 44.496 9.66e-157 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre2g05772 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05772 - - gmx:100778085 771.926