Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05764 ATGAGTCTAGTTTATGAATTTATGTTCCTTTTGTTTTCACACCTCATGATGCTACTTGTGTTGGTGGGTGGAGATAAGAGTAACTACCAACAAAAGTGTCCACCTTCATTTGTTTGTGGATTCCTAGGCAATATCAGCTTCCCTTTCACTACAACAGAGCGCCCGGACTGTGGCTTATTGCCAATAACCAATTGTGGTGATGCTCCGCTGACGCCCAAAATGATCCAATTTCTGAATAAAGGGAAACAATTTGAGTTTGAGGTTGCAATTTTAAGACCTCTTGAGTATCACGGTGGTAGTGCTACTTGTAATTGTGTTTTTAGAGACAAACATCTCTACGGACTGCTGGAAAACAAAAGTTGTGAAGCTTTCAGATATAATTATACTCTCCCTCCCACCACTCACTTTGTTTCTTTTCATATGGAATTTAATGCAACCTTGTTCATGTGCAACCGTACTCACCGTGTCAATCCTTCAACATATGTGCATAACTATACAAAGTGTTCTCTTTATGATCTCTACTACCAGCCTTACCACTATGCTGATAGTGCATCTCGGAGTGCTTTTACAGCTTGTACAAATGTCCACCTTCCGGCTAAAGACTTTGCTGACTCTGACGACCCTTTTACTTTTGTTACTGCCGATATCCCAATTCAAGTAAGCATAACAAAGGAATGTGCATATTGTCACTACAACCAAAGTGGACGGTGCAAGGTTGACAGCAACGGGAAGTTTTATTGTGCCGACTGTATACTAAATGATAAAAAAGGACTAAGTCGGAATGCCAAACTGGGAATAGGTTTTGGAATCACAGGCATCTTATTGATTGGTTTGCCGTTTCTCCTTCTACTCTACAAACGGAAACGTGCTATCTCGGTTGGACACTTCCAATCTAGTTACTCTTTTTCCGATTCTTCCATGAATCCACGCCGAGAAATGGGTAGTAAATACTTTGGAGTTCCACTATTCTCCTACGACGAGCTTAGAAAAGCAACAAACAATTTTGACCATAATAAAGAACTTGGAGATGGAGGCTTTGGTACTGTCTACTTAGGGAAACTTCCCGATGGACGTGAAGTTGCTGTCAAGCGTTTATATGAACACAACTATAGGAGGGTAGAACAGTTCATGAATGAAGTTAATATCCTCACAACTTTGCGGCACAAAAATCTCGTGTCCCTCTATGGATGCACATCACGGCACAGCCGTGAACTACTACTTGTGTATGAATATATCTCAAATGGCACAATTGCATGTCATCTCCATGGTGAATTGGCCAAGCCCGGCTTACTACCATGGTCTATACGAATTAAAATTGCTATAGAAACCGCTACTGCCTTGGCTTATCTCCATGCTTCTGGTATCATTCACCGTGACGTGAAAACCAGCAACATACTCCTCGACGAAAATTTTGGTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTCTTCCCTGAAGATGCCACTCATGTCTCCACAGCTCCACAAGGGACACCAGGTTACCTTGATCCCGAGTATCACCAATTTTATCAGCTTACTAGCAAGAGTGATGTATATAGTTTTGGAGTTGTGCTCATTGAGCTAATATCATCTAAGCCTGCTGTTGATATAAACAGAAGTAGGGAAGAGATTAACTTGTCAACTCTAGCCACAAGGAAGATTCAAGAAAGTGCAATTGATGAACTGGTAGATCCTTGTCTTGGTTTTAATTCAGACAATGAGGTTAATAGGATGATAGTTTCAGTGGCAGAATTGGCTTTTCAATGTTTGCAAAGGGATAAGGAGTTGAGACCTTCTATGGAAGAAGTCCTAGATGAACTTAAGAGAATAGAGAATGGTAAGGACATGGTTGAGGTTGTAGAAGAGGCAGATGTTGATGATGTTGGATCTTCACACAGTAATGTAAATCCACCAACAATACTAGCCTCACCTGAATGGGATGAAGTTGGATTGTTGAAGAATACGAAAAATACGAAGCATCCATCTTCACCAAACACCGTCACTGATAAATGGGAAAGTATAAGTACTACGCCTAATGCCAGTGCTTAA 2049 0.409 MSLVYEFMFLLFSHLMMLLVLVGGDKSNYQQKCPPSFVCGFLGNISFPFTTTERPDCGLLPITNCGDAPLTPKMIQFLNKGKQFEFEVAILRPLEYHGGSATCNCVFRDKHLYGLLENKSCEAFRYNYTLPPTTHFVSFHMEFNATLFMCNRTHRVNPSTYVHNYTKCSLYDLYYQPYHYADSASRSAFTACTNVHLPAKDFADSDDPFTFVTADIPIQVSITKECAYCHYNQSGRCKVDSNGKFYCADCILNDKKGLSRNAKLGIGFGITGILLIGLPFLLLLYKRKRAISVGHFQSSYSFSDSSMNPRREMGSKYFGVPLFSYDELRKATNNFDHNKELGDGGFGTVYLGKLPDGREVAVKRLYEHNYRRVEQFMNEVNILTTLRHKNLVSLYGCTSRHSRELLLVYEYISNGTIACHLHGELAKPGLLPWSIRIKIAIETATALAYLHASGIIHRDVKTSNILLDENFGVKVADFGLSRLFPEDATHVSTAPQGTPGYLDPEYHQFYQLTSKSDVYSFGVVLIELISSKPAVDINRSREEINLSTLATRKIQESAIDELVDPCLGFNSDNEVNRMIVSVAELAFQCLQRDKELRPSMEEVLDELKRIENGKDMVEVVEEADVDDVGSSHSNVNPPTILASPEWDEVGLLKNTKNTKHPSSPNTVTDKWESISTTPNASA 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05764 682 CDD STKc_IRAK 341 610 - -
Trre2g05764 682 Pfam Protein kinase domain 336 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05764 682 SMART serkin_6 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05764 682 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 307 411 - -
Trre2g05764 682 FunFam Wall-associated receptor kinase-like 20 412 619 - -
Trre2g05764 682 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 676 IPR044652 GO:0004672
Trre2g05764 682 MobiDBLite consensus disorder prediction 654 682 - -
Trre2g05764 682 Gene3D Transferase(Phosphotransferase) domain 1 412 624 - -
Trre2g05764 682 MobiDBLite consensus disorder prediction 655 682 - -
Trre2g05764 682 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Trre2g05764 682 ProSiteProfiles Protein kinase domain profile. 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05764 682 Gene3D Phosphorylase Kinase; domain 1 306 411 - -
Trre2g05764 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Trre2g05764 682 SUPERFAMILY Protein kinase-like (PK-like) 311 607 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05764 Trre-Chr2 63365293 63368112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05764 37 682 Receptor kinase-like Gene Family AT1G25390 46.923 2.58e-169 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre2g05764 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05764 - - gmx:100305407 790.415