Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05763 ATGAGTCTAGTTTATGAATTTATGTTCCTTTTGTTTTCACACCTCATGATGCTACTTGTGTTGGTGGGTGGAGATAAGAGTAACTACCAACAAAAGTGTCCACCTTCATTTGTTTGTGGATTCCTAGGCAATATCAGCTTCCCTTTCACTACAACAGAGCGCCCGGACTGTGGCTTATTGCCAATAACCAATTGTGGTGATGCTCCGCTGACGCCCAAAATGATCCAATTTCTGAATAAAGGGAAACAATTTGAGTTTGAGGTTGCAATTTTAAGACCTCTTGAGTATCACGGTGGTAGTGCTACTTGTAATTGTGTTTTTAGAGACAAACATCTCTACGGACTGCTGGAAAACAAAAGTTGTGAAGCTTTCAGATATAATTATACTCTCCCTCCCACCACTCACTTTGTTTCTTTTCATATGGAATTTAATGCAACCTTGTTCATGTGCAACCGTACTCACCGTGTCAATCCTTCAACATATGTGCATAACTATACAAAGTGTTCTCTTTATGATCTCTACTACCAGCCTTACCACTATGCTGATAGTGCATCTCGGAGTGCTTTTACAGCTTGTACAAATGTCCACCTTCCGGCTAAAGACTTTGCTGACTCTGACGACCCTTTTACTTTTGTTACTGCCGATATCCCAATTCAAGTAAGCATAACAAAGGAATGTGCATATTGTCACTACAACCAAAGTGGACGGTGCAAGGTTGACAGCAACGGGAAGTTTTATTGTGCCGACTATAAAAAAGGACTAAGTCGGAATGCCAAACTGGGAATAGGTTTTGGAATCACAGGCATCTTATTGATTGGTTTGCCGTTTCTCCTTCTACTCTACAAACGGAAACGTGCTATCTCGGTTGGACACTTCCAATCTAGTTACTCTTTTTCCGATTCTTCCATGAATCCACGCCGAGAAATGGGTAGTAAATACTTTGGAGTTCCACTATTCTCCTACGACGAGCTTAGAAAAGCAACAAACAATTTTGACCATAATAAAGAACTTGGAGATGGAGGCTTTGGTACTGTCTACTTAGGGAAACTTCCCGATGGACGTGAAGTTGCTGTCAAGCGTTTATATGAACACAACTATAGGAGGGTAGAACAGTTCATGAATGAAGTTAATATCCTCACAACTTTGCGGCACAAAAATCTCGTGTCCCTCTATGGATGCACATCACGGCACAGCCGTGAACTACTACTTGTGTATGAATATATCTCAAATGGCACAATTGCATGTCATCTCCATGGTGAATTGGCCAAGCCCGGCTTACTACCATGGTCTATACGAATTAAAATTGCTATAGAAACCGCTACTGCCTTGGCTTATCTCCATGCTTCTGGTATCATTCACCGTGACGTGAAAACCAGCAACATACTCCTCGACGAAAATTTTGGTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTCTTCCCTGAAGATGCCACTCATGTCTCCACAGCTCCACAAGGGACACCAGGTTACCTTGATCCCGAGTATCACCAATTTTATCAGCTTACTAGCAAGAGTGATGTATATAGTTTTGGAGTTGTGCTCATTGAGCTAATATCATCTAAGCCTGCTGTTGATATAAACAGAAGTAGGGAAGAGATTAACTTGTCAACTCTAGCCACAAGGAAGATTCAAGAAAGTGCAATTGATGAACTGGTAGATCCTTGTCTTGGTTTTAATTCAGACAATGAGGTTAATAGGATGATAGTTTCAGTGGCAGAATTGGCTTTTCAATGTTTGCAAAGGGATAAGGAGTTGAGACCTTCTATGGAAGAAGTCCTAGATGAACTTAAGAGAATAGAGAATGGTAAGGACATGGTTGAGGTTGTAGAAGAGGCAGATGTTGATGATGTTGGATCTTCACACAGTAATGTAAATCCACCAACAATACTAGCCTCACCTGAATGGGATGAAGTTGGATTGTTGAAGAATACGAAAAATACGAAGCATCCATCTTCACCAAACACCGTCACTGATAAATGGGAAAGTATAAGTACTACGCCTAATGCCAGTGCTTAA 2037 0.4099 MSLVYEFMFLLFSHLMMLLVLVGGDKSNYQQKCPPSFVCGFLGNISFPFTTTERPDCGLLPITNCGDAPLTPKMIQFLNKGKQFEFEVAILRPLEYHGGSATCNCVFRDKHLYGLLENKSCEAFRYNYTLPPTTHFVSFHMEFNATLFMCNRTHRVNPSTYVHNYTKCSLYDLYYQPYHYADSASRSAFTACTNVHLPAKDFADSDDPFTFVTADIPIQVSITKECAYCHYNQSGRCKVDSNGKFYCADYKKGLSRNAKLGIGFGITGILLIGLPFLLLLYKRKRAISVGHFQSSYSFSDSSMNPRREMGSKYFGVPLFSYDELRKATNNFDHNKELGDGGFGTVYLGKLPDGREVAVKRLYEHNYRRVEQFMNEVNILTTLRHKNLVSLYGCTSRHSRELLLVYEYISNGTIACHLHGELAKPGLLPWSIRIKIAIETATALAYLHASGIIHRDVKTSNILLDENFGVKVADFGLSRLFPEDATHVSTAPQGTPGYLDPEYHQFYQLTSKSDVYSFGVVLIELISSKPAVDINRSREEINLSTLATRKIQESAIDELVDPCLGFNSDNEVNRMIVSVAELAFQCLQRDKELRPSMEEVLDELKRIENGKDMVEVVEEADVDDVGSSHSNVNPPTILASPEWDEVGLLKNTKNTKHPSSPNTVTDKWESISTTPNASA 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05763 678 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 672 IPR044652 GO:0004672
Trre2g05763 678 Pfam Protein kinase domain 332 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05763 678 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 303 407 - -
Trre2g05763 678 MobiDBLite consensus disorder prediction 650 678 - -
Trre2g05763 678 CDD STKc_IRAK 337 606 - -
Trre2g05763 678 MobiDBLite consensus disorder prediction 651 678 - -
Trre2g05763 678 Gene3D Transferase(Phosphotransferase) domain 1 408 620 - -
Trre2g05763 678 SUPERFAMILY Protein kinase-like (PK-like) 307 603 IPR011009 -
Trre2g05763 678 FunFam Wall-associated receptor kinase-like 20 408 615 - -
Trre2g05763 678 ProSiteProfiles Protein kinase domain profile. 331 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05763 678 Gene3D Phosphorylase Kinase; domain 1 302 407 - -
Trre2g05763 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Trre2g05763 678 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Trre2g05763 678 SMART serkin_6 331 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05763 Trre-Chr2 63365293 63368112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05763 37 678 Receptor kinase-like Gene Family AT1G25390 46.832 3.96e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre2g05763 Pkinase 4.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05763 - - gmx:100305407 791.956