Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g05762 ATGACTCCATTATATTTTTTCTGCTTCCTCTTGTATTGTCACTTCGCGCTGATTTTATCAGAAGGGAATGGAAGCGGGTACCAATATAACTGTCCACGCTCATTCAGTTGTGGAATTCGTGGGACTTTACGTTACCCTTTCACCAAGGCAGAACAACCAGACTGTGGTTTCATGTTCATATATGGCTGTGATGCCAGTTATTATTCACCCAAATACATCCAATTGGAGAAGAATGCAAAAACCACAGAGCTAACCAGTGTCATCGACCAGAATACCGTTACTCTTTCTGACCAATATTTTTACAAGCGTTTGCAAAATAATGTCTGTGATACTTTGAACCACAATTACACTCTTCCTTCCCCTTCTCCTTTGGTTTCTTTTTATATAGATTATAACGTAACTCTCTTCCGATGCAATCACGGCCACAATATCAATCCCCCTGCAAACTATTTTCGATACAAATGTCCTAACTACAATATCTATTATGACAGTAATCCATATCCCAATGTTACTACAGAGAAGGCGCATAACTTTTTCCCATCCTGCTCGTTACTTCAGTTTCCAACTAAAGATTTGACTGATACCAAAAACATTTTATCATTTGTATCTAGTCAGATGGTTGTTAAAATAGTATTATCTGCTGATTGTGATGAGTGCTGCAACCATAGAGGCGGCCAATGTAGGCTTGATGCCAACAAAATGTTCTACTGTCACAATGGGCCGAAGAAGAAGAGAAAATATTTTAAGCTGCTACTTGGACTTGGAATAGGTTTAATCGTTACATTGTTTGCACTGGTTATTCTTATAATTCGATGCCACTCCAGAAGAAAGCATGCTCCATCTGACCACCAGAATCAATCGAGAAGCACATATACTGATGCGATTGATTCTTACCATAATCCAGGTCCAGAAAACGGCACTGCCTACTTTAAAATCCCTCTGTTCTCTTACAAGGAGCTAGAGGAAGCTACAAATAATTTTCACCACGCCAACCAACTTGGAAGCGGAGGCTTTGGAATAGTTTACTATGGAAAACTGCGAGATGGACGGGAAGTTGCTATTAAGCGCCCATATGAACATAACTGGAGGCGAGTAGAACAGTTCACAAATGAAATTGAGATCCTTGCTCGCACACGCCACACCAATCTTGTATCCCTCTATGGCTGTACTTCATATCATAGTGATGAACTACTGCTTGTGTACGAACATGTTCCAAATCACACCGTTGCTTCTCATCTCCATGGTGATTTAGCAAGAACAGGCACACTTCCTTGGCATATCAGGATGAAAATTGCCATAGAGACAGCAAATTCATTGGCTTATCTGCATGCTTCTGGCATCATCCACCGTGACGTGAAAACCAAAAACATTCTCCTTACAAACAATTTCAGTGTTAAAGTTGCAGATTTTGGTCTTTCAAGGCTATTCCCCCTAGATATCACCCATGCTTCTACGGCGCCACAAGGGACACCAGGTTACGTTGATCCGGAATATCATCAATGCTACCAGCTTACTAGCAAGAGTGATGTATACAGTTTTGGTGTTGTGCTCATTGAGCTAATATCATCTAAGCTCGCTGTTGACATGAACAGGCATAAGGATGAGATCAACTTGTCAAACCTGGCCTTAAAGAAGATCCAAGAGGGTGCACTTACTGAGCTGGTGGATCCTTATCTTGCTTTTGATTCAGACAATGAGGTTAAGAGGATGATAGTTTCGGTTGCAGAGTTGGCTTTTCAATGTTTGCAAAGGGACAAAGAATTGAGACCTTCCATGGATGAGGTTTTGAAGGTGCTGATGAGAATTGAAAGTGGGAAGGATGTGCCTGAGCATATAGTTGAAGAAGATGAGCGTCCACACTCTCCAGTTTCACCAGACGGGGATGAGATTGAGATTGAATTATTCCATAAAATGATGCCACAGCCATCACCTAAAGCTGTGGTTGATAAATGGAATAGTCAATCTACTTCGTCTAATACCAGTGGTCATTAA 1992 0.4106 MTPLYFFCFLLYCHFALILSEGNGSGYQYNCPRSFSCGIRGTLRYPFTKAEQPDCGFMFIYGCDASYYSPKYIQLEKNAKTTELTSVIDQNTVTLSDQYFYKRLQNNVCDTLNHNYTLPSPSPLVSFYIDYNVTLFRCNHGHNINPPANYFRYKCPNYNIYYDSNPYPNVTTEKAHNFFPSCSLLQFPTKDLTDTKNILSFVSSQMVVKIVLSADCDECCNHRGGQCRLDANKMFYCHNGPKKKRKYFKLLLGLGIGLIVTLFALVILIIRCHSRRKHAPSDHQNQSRSTYTDAIDSYHNPGPENGTAYFKIPLFSYKELEEATNNFHHANQLGSGGFGIVYYGKLRDGREVAIKRPYEHNWRRVEQFTNEIEILARTRHTNLVSLYGCTSYHSDELLLVYEHVPNHTVASHLHGDLARTGTLPWHIRMKIAIETANSLAYLHASGIIHRDVKTKNILLTNNFSVKVADFGLSRLFPLDITHASTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSKLAVDMNRHKDEINLSNLALKKIQEGALTELVDPYLAFDSDNEVKRMIVSVAELAFQCLQRDKELRPSMDEVLKVLMRIESGKDVPEHIVEEDERPHSPVSPDGDEIEIELFHKMMPQPSPKAVVDKWNSQSTSSNTSGH 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g05762 663 SMART serkin_6 327 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05762 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Trre2g05762 663 MobiDBLite consensus disorder prediction 643 663 - -
Trre2g05762 663 Pfam Protein kinase domain 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g05762 663 Gene3D Phosphorylase Kinase; domain 1 303 403 - -
Trre2g05762 663 MobiDBLite consensus disorder prediction 647 663 - -
Trre2g05762 663 FunFam Wall-associated receptor kinase-like 20 404 611 - -
Trre2g05762 663 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Trre2g05762 663 Gene3D Transferase(Phosphotransferase) domain 1 404 612 - -
Trre2g05762 663 SUPERFAMILY Protein kinase-like (PK-like) 307 600 IPR011009 -
Trre2g05762 663 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 657 IPR044652 GO:0004672
Trre2g05762 663 ProSiteProfiles Protein kinase domain profile. 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g05762 Trre-Chr2 63361532 63363852 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g05762 33 663 Receptor kinase-like Gene Family AT1G25390 45.925 8.84e-164 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre2g05762 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g05762 - - psat:127098519 1076.62